chr5 : 16,187,713 16,187,937
224 bp 44 TFs 2 linked genes
This 224 bp open chromatin element is linked to MARCHF11-DT and MARCHF11 and is bound by 44 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MARCHF11-DT 7.5 kb Proximal Proximity
MARCHF11 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:16,182,713 – 16,192,937
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 149 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 224 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 207 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 167 bp overlap
CDK9 1 dataset
ChIP HEK293T_SIBRD4 GSE51633.CDK9.HEK293T_SIBRD4 95 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 224 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 214 bp overlap
CUX1 1 dataset
ChIP Hep-G2 ENCSR049KIZ.CUX1.Hep-G2 215 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 58 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 127 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 71 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 176 bp overlap
FOSL1 1 dataset
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 136 bp overlap
FOSL2 5 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 130 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 157 bp overlap
ChIP HepG2 ENCFF548CXY 177 bp overlap
ChIP HepG2 ENCFF796NIA 181 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 166 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 142 bp overlap
HNF4A 2 datasets
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 224 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 224 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 224 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 224 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 224 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 224 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 224 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 224 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 224 bp overlap
JUND 2 datasets
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 111 bp overlap
ChIP HepG2 ENCFF869OPW 205 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 64 bp overlap
MLX 1 dataset
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 134 bp overlap
MYC 2 datasets
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 122 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 88 bp overlap
NANOG 2 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 139 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 198 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 124 bp overlap
OGG1 1 dataset
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 80 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 190 bp overlap
ChIP HepG2 ENCFF243FIR 224 bp overlap
ONECUT2 2 datasets
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 217 bp overlap
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 131 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 217 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 153 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 224 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 83 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 130 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 59 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 224 bp overlap
SOX4 2 datasets
ChIP MDA-MB-231 GSE104760.SOX4.MDA-MB-231 194 bp overlap
ChIP MDA-MB-231_TGFb GSE104760.SOX4.MDA-MB-231_TGFb 223 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 153 bp overlap
STAT3 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 119 bp overlap
TCF7 1 dataset
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 147 bp overlap
TCF7L2 7 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 224 bp overlap
ChIP HCT116 ENCFF038POZ 213 bp overlap
ChIP HeLa-S3 ENCFF673QAB 224 bp overlap
ChIP HeLa-S3 ENCSR000EVE.TCF7L2.HeLa-S3 222 bp overlap
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 211 bp overlap
ChIP HepG2 ENCFF510OLG 224 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 224 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 224 bp overlap
TP53 1 dataset
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 177 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 196 bp overlap