chr4 : 175,776,079 – 175,776,640
561 bp 72 TFs 0 linked genes
This 561 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:175,771,079 – 175,781,640
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 445 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 411 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 162 bp overlap
BACH2 2 datasets
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
Motif ES_0h ES_0h-BACH2_MA1470.2 19 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 246 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 228 bp overlap
CHD4 2 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 210 bp overlap
ChIP 501-mel GSE134848.CHD4.501-mel 77 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 154 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 363 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 151 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 199 bp overlap
CREB3L4 2 datasets
Motif DE_12h DE_12h-CREB3L4_MA1475.2 9 bp overlap
Motif ES_0h ES_0h-CREB3L4_MA1475.2 9 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 327 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 155 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 184 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 167 bp overlap
ETV5::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 386 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 402 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 477 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 259 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 166 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 285 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 173 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 237 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 561 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 417 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 465 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 541 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 221 bp overlap
ChIP hESC GSE18292.NANOG.hESC 178 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 371 bp overlap
NOTCH1 1 dataset
ChIP GSC8-11_dasatinib GSE74557.NOTCH1.GSC8-11_dasatinib 198 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap
OSR1 2 datasets
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
Motif ES_0h ES_0h-OSR1_MA1542.2 8 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 184 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 462 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 383 bp overlap
POU5F1 7 datasets
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 561 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 432 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 359 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 272 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 411 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 278 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RBPJ 3 datasets
ChIP GIC GSE79734.RBPJ.GIC 227 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 296 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 413 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 273 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 455 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 125 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 159 bp overlap
SMAD2_3 1 dataset
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 253 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 303 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 201 bp overlap
SMARCA4 8 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 138 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 87 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 139 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 188 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 199 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 256 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 405 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 512 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 361 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 561 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 406 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 270 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 497 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 284 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 292 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 370 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SPIC 2 datasets
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Spz1 2 datasets
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Motif ES_0h ES_0h-Spz1_MA0111.1 11 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 190 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 143 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 253 bp overlap
TCF7L1 4 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 401 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 167 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF547 2 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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