chr4 : 173,660,594 – 173,661,454
860 bp 71 TFs 0 linked genes
This 860 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:173,655,594 – 173,666,454
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ATF4 2 datasets
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
Arid3a 2 datasets
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BARX2 1 dataset
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
CEBPG 2 datasets
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
CTCF 1 dataset
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
DUX4 4 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
DUXA 2 datasets
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Dux 2 datasets
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
E2F6 1 dataset
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 468 bp overlap
ChIP DE DE-FOXA2-2 630 bp overlap
ChIP HepG2 ENCFF570ABM 405 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 433 bp overlap
ChIP DE DE-GATA4-2 527 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 574 bp overlap
ChIP DE DE-GATA6-2 462 bp overlap
GCM2 1 dataset
Motif DE_36h DE_36h-GCM2_MA0767.2 8 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 348 bp overlap
HOXA4 2 datasets
Motif DE_36h DE_36h-HOXA4_MA1496.2 7 bp overlap
Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap
HOXB4 2 datasets
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
ISL2 1 dataset
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
Isl1 1 dataset
Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap
JUN 2 datasets
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
KLF17 3 datasets
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
MEF2B 2 datasets
Motif DE_36h DE_36h-MEF2B_MA0660.1 12 bp overlap
Motif DE_48h DE_48h-MEF2B_MA0660.1 12 bp overlap
MEF2D 2 datasets
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
Motif DE_48h DE_48h-MEF2D_MA0773.1 12 bp overlap
NFATC3 1 dataset
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap
NFIA 1 dataset
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
NFYA 2 datasets
Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap
Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap
NFYC 2 datasets
Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap
Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap
NKX6-3 2 datasets
Motif DE_36h DE_36h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_36h DE_36h-NKX6-3_MA1530.2 8 bp overlap
Nfatc1 1 dataset
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POU6F1 2 datasets
Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap
Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap
PPARG 2 datasets
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
Motif DE_48h DE_48h-PPARG_MA0066.2 19 bp overlap
PRDM9 3 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Prdm14 1 dataset
Motif DE_36h DE_36h-Prdm14_MA1998.2 8 bp overlap
RARA 2 datasets
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SP5 3 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Six3 1 dataset
Motif DE_36h DE_36h-Six3_MA0631.2 11 bp overlap
VENTX 1 dataset
Motif DE_36h DE_36h-VENTX_MA0724.1 9 bp overlap
Wt1 1 dataset
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
ZBTB24 1 dataset
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZKSCAN5 2 datasets
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF157 1 dataset
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
ZNF16 1 dataset
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
ZNF189 2 datasets
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
ZNF281 1 dataset
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF341 2 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ZNF410 1 dataset
Motif DE_36h DE_36h-ZNF410_MA0752.2 16 bp overlap
ZNF524 1 dataset
Motif DE_36h DE_36h-ZNF524_MA2096.1 9 bp overlap
ZNF558 1 dataset
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF677 2 datasets
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
ZNF701 2 datasets
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZNF707 3 datasets
ChIP HEK293 ENCFF249FMX 337 bp overlap
ChIP HEK293 ENCSR854IPI.ZNF707.HEK293 280 bp overlap
ChIP K562 ENCFF243WRW 301 bp overlap
ZNF708 1 dataset
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
ZNF770 1 dataset
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
ZNF8 1 dataset
Motif DE_36h DE_36h-ZNF8_MA1718.1 20 bp overlap
ZNF816 1 dataset
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
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