chr4 : 147,724,426 – 147,725,089
663 bp 48 TFs 1 linked gene
This 663 bp open chromatin element is linked to ARHGAP10 and is bound by 48 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARHGAP10 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:147,719,426 – 147,730,089
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
AR 10 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 254 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 145 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 155 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 262 bp overlap
ChIP VCaP GSE148358.AR.VCaP 159 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 446 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 268 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 109 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 180 bp overlap
ARID1A 1 dataset
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 355 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCSR725LYT.ARID3A.GM12878 122 bp overlap
ASH2L 2 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 199 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 302 bp overlap
BRD4 1 dataset
ChIP VCaP GSE148358.BRD4.VCaP 239 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 134 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 117 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 232 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 114 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 185 bp overlap
ESR1 5 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 109 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 199 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 243 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 243 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 229 bp overlap
EZH2 1 dataset
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 137 bp overlap
FOXA1 74 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 359 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 215 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 231 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 281 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 222 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 200 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 203 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 350 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 196 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 160 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 235 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 294 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 248 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 290 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 274 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 140 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 392 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 180 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 218 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 175 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 203 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 188 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 269 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 238 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 221 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 177 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 171 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 228 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 241 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 231 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 327 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 331 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 309 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 417 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 223 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 300 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 237 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 209 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 153 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 166 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 308 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 278 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 257 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 302 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 240 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 223 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 174 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 229 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 224 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 149 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 364 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 299 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 381 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 371 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 351 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 471 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 403 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 380 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 270 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 395 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 215 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 323 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 207 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 328 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 382 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 260 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 379 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 317 bp overlap
ChIP prostate_P19 GSE130408.FOXA1.prostate_P19 162 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 242 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 257 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 195 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 202 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 156 bp overlap
ChIP DE DE-FOXA2-1 522 bp overlap
ChIP DE DE-FOXA2-2 588 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 389 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 501 bp overlap
ChIP DE DE-GATA4-1 513 bp overlap
ChIP DE DE-GATA4-2 443 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 509 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 420 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 421 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 251 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 99 bp overlap
HOXB13 12 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 220 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 91 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 169 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 190 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 241 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 199 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 289 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 243 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 264 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 233 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 283 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 221 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 142 bp overlap
ChIP U266 GSE142493.IRF4.U266 140 bp overlap
JUN 2 datasets
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 284 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 231 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 572 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 374 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 389 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 281 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 438 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 94 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 172 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-361 GSE152203.NR3C1.MDA-MB-361 152 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 211 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 179 bp overlap
ChIP HepG2 ENCFF243FIR 341 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 521 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 361 bp overlap
PGR 6 datasets
ChIP T-47D GSE31129.PGR.T-47D 133 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 369 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 127 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 143 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 100 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 169 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 95 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 73 bp overlap
RELA 5 datasets
ChIP GM12878 ENCSR664POU.RELA.GM12878 324 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 152 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 254 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 253 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 171 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 281 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 356 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 228 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 303 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 426 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 262 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 344 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 298 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 182 bp overlap
STAT3 1 dataset
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 315 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 235 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BKU.YY1.K-562 141 bp overlap
ZBTB33 1 dataset
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 274 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 237 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 114 bp overlap
ZNF343 1 dataset
ChIP HEK293T GSE78099.ZNF343.HEK293T 167 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 249 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 134 bp overlap
Huangfu Lab · Publications · Resources · Contact