chr4 : 104,593,004 104,593,507
503 bp 48 TFs 0 linked genes
This 503 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:104,588,004 – 104,598,507
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
AR 4 datasets
ChIP prostate GSE56288.AR.prostate 262 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 187 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 358 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 234 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 292 bp overlap
BRD4 2 datasets
ChIP DND41_E GSE54379.BRD4.DND41_E 393 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 156 bp overlap
Bach1::Mafk 2 datasets
Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap
Motif ES_0h ES_0h-Bach1Mafk_MA0591.2 12 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 227 bp overlap
CREB1 1 dataset
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 223 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 324 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 503 bp overlap
EP300 2 datasets
ChIP gastroesophageal sphincter ENCFF211FPL 251 bp overlap
ChIP upper lobe of left lung ENCFF024QBJ 261 bp overlap
ERG 3 datasets
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 175 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 253 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 166 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 125 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 160 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FLI1 10 datasets
ChIP A-673 GSE99959.FLI1.A-673 324 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 455 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 456 bp overlap
ChIP A-673_D10 GSE129155.FLI1.A-673_D10 293 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 366 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 476 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 392 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 323 bp overlap
ChIP SK-N-MC GSE61944.FLI1.SK-N-MC 259 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.FLI1.SK-N-MC_SHGFP_96H 294 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 209 bp overlap
GABPA 2 datasets
ChIP liver ENCFF027VSJ 413 bp overlap
ChIP liver ENCSR350ORK.GABPA.liver 238 bp overlap
GATA2 4 datasets
ChIP ESF GSE108408.GATA2.ESF 487 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 423 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 364 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 398 bp overlap
ISL1 1 dataset
ChIP A2780_cisplatin GSE129700.ISL1.A2780_cisplatin 356 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 70 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 212 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 503 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 503 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 342 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 211 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 216 bp overlap
NR2F2 5 datasets
ChIP liver ENCFF427MRU 364 bp overlap
ChIP liver ENCFF565JGD 424 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 300 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 462 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 285 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 284 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 172 bp overlap
POLR2A 8 datasets
ChIP SK-N-MC ENCFF088IVG 481 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 341 bp overlap
ChIP sigmoid colon ENCFF725QFT 417 bp overlap
ChIP sigmoid colon ENCFF748YVT 445 bp overlap
ChIP sigmoid colon ENCFF754JQR 359 bp overlap
ChIP spleen ENCFF044PYR 176 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP transverse colon ENCFF607LKE 371 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SMARCA2 2 datasets
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 348 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 278 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 181 bp overlap
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 64 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 475 bp overlap
SMARCC1 3 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 349 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 318 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 305 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 210 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 494 bp overlap
SPI1 3 datasets
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 126 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 227 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 227 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 245 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF274 1 dataset
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZNF324 2 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 175 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap