chr4 : 76,588,365 76,588,572
207 bp 50 TFs 1 linked gene
This 207 bp open chromatin element is linked to SHROOM3 and is bound by 50 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SHROOM3 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:76,583,365 – 76,593,572
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 150 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 207 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 176 bp overlap
BRD4 3 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 60 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 207 bp overlap
ChIP hESC GSE33281.BRD4.hESC 70 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 192 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 176 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 183 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 207 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 207 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 207 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 113 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 207 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 207 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 207 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 207 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 207 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 103 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 207 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 146 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 207 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 148 bp overlap
GATA3 2 datasets
ChIP breast_tumor_Male_16 GSE104399.GATA3.breast_tumor_Male_16 148 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 120 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 207 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 207 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 178 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 199 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 97 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 162 bp overlap
MED1 4 datasets
ChIP RH4 GSE83726.MED1.RH4 145 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 101 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 54 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 207 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 107 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 164 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 83 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 171 bp overlap
POLR2A 4 datasets
ChIP H1 ENCFF566JSR 207 bp overlap
ChIP H1 ENCFF566JSR 161 bp overlap
ChIP H1 ENCFF833NJP 207 bp overlap
ChIP prostate gland ENCFF832RQK 120 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 132 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 207 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 171 bp overlap
REST 6 datasets
ChIP H1 ENCFF429RUE 207 bp overlap
ChIP HEK293 ENCFF073DOT 207 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 187 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 207 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 202 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 150 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 152 bp overlap
SMAD2 3 datasets
ChIP hESC GSE29422.SMAD2.hESC 165 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 207 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 207 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 207 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 207 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 207 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 207 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 207 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 207 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 207 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 207 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 207 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 207 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 189 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 189 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 207 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 207 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 207 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 207 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 207 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 200 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 201 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 128 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 193 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 207 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 205 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 200 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 98 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 185 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 207 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 71 bp overlap
TBX5 4 datasets
ChIP G296S_4 GSE85628.TBX5.G296S_4 105 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 168 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 168 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 207 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 153 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 171 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 154 bp overlap
ZBTB7A 3 datasets
ChIP Ishikawa ENCFF191NFH 207 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 203 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 207 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 207 bp overlap