chr4 : 13,120,337 – 13,120,837
500 bp 104 TFs 0 linked genes
This 500 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:13,115,337 – 13,125,837
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
Motif DE_72h DE_72h-ALX3_MA0634.2 6 bp overlap
AR 1 dataset
ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 156 bp overlap
ARGFX 2 datasets
Motif DE_60h DE_60h-ARGFX_MA1463.2 8 bp overlap
Motif DE_72h DE_72h-ARGFX_MA1463.2 8 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 251 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 225 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 251 bp overlap
DRGX 2 datasets
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
Motif DE_72h DE_72h-DRGX_MA1481.2 6 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EMX1 2 datasets
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
Motif DE_72h DE_72h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
Motif DE_72h DE_72h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
Motif DE_72h DE_72h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 317 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 168 bp overlap
ESX1 2 datasets
Motif DE_60h DE_60h-ESX1_MA0644.3 7 bp overlap
Motif DE_72h DE_72h-ESX1_MA0644.3 7 bp overlap
EVX1 2 datasets
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
Motif DE_72h DE_72h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
Motif DE_72h DE_72h-EVX2_MA0888.2 6 bp overlap
FOXA1 1 dataset
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 266 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 439 bp overlap
ChIP DE DE-FOXA2-2 446 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 2 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 456 bp overlap
ChIP DE DE-GATA4-2 500 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 241 bp overlap
ChIP foregut GSE117136.GATA4.foregut 419 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 496 bp overlap
ChIP DE DE-GATA6-2 500 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 500 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 416 bp overlap
ChIP foregut GSE117136.GATA6.foregut 423 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 395 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 457 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 370 bp overlap
GSX1 2 datasets
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
Motif DE_72h DE_72h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_60h DE_60h-GSX2_MA0893.3 7 bp overlap
Motif DE_72h DE_72h-GSX2_MA0893.3 7 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HNF1B 2 datasets
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
Motif DE_72h DE_72h-HNF1B_MA0153.2 13 bp overlap
HOXA1 2 datasets
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
Motif DE_72h DE_72h-HOXA1_MA1495.2 6 bp overlap
HOXA10 2 datasets
Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap
Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap
HOXA2 2 datasets
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
Motif DE_72h DE_72h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
Motif DE_72h DE_72h-HOXA3_MA2119.1 7 bp overlap
HOXA5 2 datasets
Motif DE_60h DE_60h-HOXA5_MA0158.2 8 bp overlap
Motif DE_72h DE_72h-HOXA5_MA0158.2 8 bp overlap
HOXA6 2 datasets
Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap
Motif DE_72h DE_72h-HOXA6_MA1497.2 7 bp overlap
HOXB1 2 datasets
Motif DE_60h DE_60h-HOXB1_MA2093.1 7 bp overlap
Motif DE_72h DE_72h-HOXB1_MA2093.1 7 bp overlap
HOXB2 2 datasets
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
Motif DE_72h DE_72h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
Motif DE_72h DE_72h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
Motif DE_72h DE_72h-HOXB5_MA0904.3 6 bp overlap
HOXB6 2 datasets
Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap
Motif DE_72h DE_72h-HOXB6_MA1500.2 7 bp overlap
HOXB7 2 datasets
Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap
Motif DE_72h DE_72h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap
Motif DE_72h DE_72h-HOXB8_MA1502.2 7 bp overlap
HOXC8 2 datasets
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
Motif DE_72h DE_72h-HOXC8_MA1505.2 6 bp overlap
HOXD3 2 datasets
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
Motif DE_72h DE_72h-HOXD3_MA0912.2 8 bp overlap
HOXD8 2 datasets
Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap
Motif DE_72h DE_72h-HOXD8_MA0910.3 7 bp overlap
HOXD9 2 datasets
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap
ISX 2 datasets
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
Motif DE_72h DE_72h-ISX_MA0654.2 6 bp overlap
JUN 1 dataset
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 70 bp overlap
LHX5 2 datasets
Motif DE_60h DE_60h-LHX5_MA1519.2 7 bp overlap
Motif DE_72h DE_72h-LHX5_MA1519.2 7 bp overlap
LHX6 2 datasets
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
LMX1A 2 datasets
Motif DE_60h DE_60h-LMX1A_MA0702.3 7 bp overlap
Motif DE_72h DE_72h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_60h DE_60h-LMX1B_MA0703.3 8 bp overlap
Motif DE_72h DE_72h-LMX1B_MA0703.3 8 bp overlap
Lhx1 2 datasets
Motif DE_60h DE_60h-Lhx1_MA1518.3 10 bp overlap
Motif DE_72h DE_72h-Lhx1_MA1518.3 10 bp overlap
Lhx4 2 datasets
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Motif DE_72h DE_72h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
Motif DE_72h DE_72h-Lhx8_MA0705.2 6 bp overlap
MEOX1 2 datasets
Motif DE_60h DE_60h-MEOX1_MA0661.2 7 bp overlap
Motif DE_72h DE_72h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_60h DE_60h-MEOX2_MA0706.2 7 bp overlap
Motif DE_72h DE_72h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
Motif DE_72h DE_72h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
Motif DE_72h DE_72h-MNX1_MA0707.3 6 bp overlap
Mecom 2 datasets
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 379 bp overlap
NKX6-1 2 datasets
Motif DE_60h DE_60h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_72h DE_72h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 2 datasets
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
Motif DE_72h DE_72h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_60h DE_60h-NOTO_MA0710.2 7 bp overlap
Motif DE_72h DE_72h-NOTO_MA0710.2 7 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_72h DE_72h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2C1 2 datasets
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR2F1 2 datasets
Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap
Motif DE_72h DE_72h-NR2F1_MA1538.1 15 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 175 bp overlap
NR2F6 2 datasets
Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap
Motif DE_72h DE_72h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 2 datasets
Motif DE_60h DE_60h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_72h DE_72h-NR4A2RXRA_MA1147.2 13 bp overlap
Nr1H2 2 datasets
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
PDX1 2 datasets
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
Motif DE_72h DE_72h-PDX1_MA0132.3 6 bp overlap
POU3F3 2 datasets
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
Motif DE_72h DE_72h-POU3F3_MA0788.1 13 bp overlap
POU6F1 2 datasets
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
Motif DE_72h DE_72h-POU6F1_MA0628.2 6 bp overlap
PRRX1 2 datasets
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
Motif DE_72h DE_72h-PRRX1_MA0716.2 6 bp overlap
Pgr 2 datasets
Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap
Motif DE_72h DE_72h-Pgr_MA2323.1 17 bp overlap
RAX2 2 datasets
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
Motif DE_72h DE_72h-RAX2_MA0717.2 6 bp overlap
RUNX3 2 datasets
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
SHOX 2 datasets
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
Motif DE_72h DE_72h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 436 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 397 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 190 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 296 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 363 bp overlap
SP5 4 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Shox2 2 datasets
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
Motif DE_72h DE_72h-Shox2_MA0720.2 6 bp overlap
TLX2 2 datasets
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
Motif DE_72h DE_72h-TLX2_MA1577.2 6 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
UNCX 2 datasets
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
Motif DE_72h DE_72h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_60h DE_60h-VAX1_MA0722.2 7 bp overlap
Motif DE_72h DE_72h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
Motif DE_72h DE_72h-VAX2_MA0723.3 6 bp overlap
VSX1 2 datasets
Motif DE_60h DE_60h-VSX1_MA0725.2 7 bp overlap
Motif DE_72h DE_72h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_60h DE_60h-VSX2_MA0726.2 7 bp overlap
Motif DE_72h DE_72h-VSX2_MA0726.2 7 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZIC4 2 datasets
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 228 bp overlap
ZNF16 3 datasets
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
Motif DE_72h DE_72h-ZNF16_MA1654.2 21 bp overlap
ZNF263 6 datasets
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ChIP HEK293 ENCFF336CWQ 268 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 161 bp overlap
ZNF274 3 datasets
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap
Motif DE_72h DE_72h-ZNF274_MA1592.2 12 bp overlap
ZNF354C 3 datasets
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_72h DE_72h-ZNF354C_MA0130.1 6 bp overlap
ZNF684 2 datasets
Motif DE_60h DE_60h-ZNF684_MA1600.2 14 bp overlap
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
mix-a 2 datasets
Motif DE_60h DE_60h-mix-a_MA0621.2 7 bp overlap
Motif DE_72h DE_72h-mix-a_MA0621.2 7 bp overlap
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