chr2 : 160,202,276 160,203,083
807 bp 73 TFs 2 linked genes
This 807 bp open chromatin element is linked to PLA2R1 and RBMS1 and is bound by 73 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PLA2R1 140.1 kb Distal Multiome
RBMS1 291.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:160,197,276 – 160,208,083
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 197 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 141 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF010ZUU 190 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 187 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 151 bp overlap
CREB3L1 1 dataset
Motif DE_60h DE_60h-CREB3L1_MA0839.2 13 bp overlap
Crx 2 datasets
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DPRX 2 datasets
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
EHF 3 datasets
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap
Motif DE_72h DE_72h-EHF_MA0598.4 9 bp overlap
ELF1 3 datasets
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap
Motif DE_72h DE_72h-ELF1_MA0473.4 9 bp overlap
ELF3 3 datasets
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap
Motif DE_72h DE_72h-ELF3_MA0640.3 9 bp overlap
ELK4 3 datasets
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
Motif DE_60h DE_60h-ELK4_MA0076.3 9 bp overlap
Motif DE_72h DE_72h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 214 bp overlap
ESR1 3 datasets
ChIP MCF-7_E2+4OHT GSE119702.ESR1.MCF-7_E2+4OHT 320 bp overlap
ChIP MCF-7_Fulv GSE117941.ESR1.MCF-7_Fulv 279 bp overlap
ChIP MCF-7_OHT GSE119702.ESR1.MCF-7_OHT 320 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 184 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 240 bp overlap
ETV1 3 datasets
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap
Motif DE_72h DE_72h-ETV1_MA0761.3 9 bp overlap
Erg 3 datasets
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 312 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 409 bp overlap
ChIP DE DE-FOXA2-1 687 bp overlap
ChIP DE DE-FOXA2-2 688 bp overlap
FOXB1 2 datasets
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
GABPA 3 datasets
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap
Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap
GATA1::TAL1 5 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 6 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 144 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 156 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 620 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 145 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 241 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 517 bp overlap
GATA3 6 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 210 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 185 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 182 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 334 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 146 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 279 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 448 bp overlap
ChIP DE DE-GATA4-1 807 bp overlap
ChIP DE DE-GATA4-2 807 bp overlap
ChIP foregut GSE117136.GATA4.foregut 404 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 807 bp overlap
ChIP DE DE-GATA6-2 807 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 648 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 329 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 418 bp overlap
GSC 2 datasets
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Hand1 1 dataset
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 182 bp overlap
IKZF2 6 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
ChIP GM12878 ENCFF918AID 386 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 293 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 176 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 180 bp overlap
Ikzf3 3 datasets
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_72h DE_72h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 2 datasets
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 393 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 292 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 129 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
OTX1 2 datasets
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_48h DE_48h-OTX2_MA0712.3 7 bp overlap
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 133 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 157 bp overlap
PITX1 2 datasets
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_48h DE_48h-PITX2_MA1547.2 8 bp overlap
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
RHOXF1 2 datasets
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 636 bp overlap
SMAD2 2 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 222 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 717 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 560 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 520 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 234 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 225 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 243 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 719 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 471 bp overlap
SPI1 7 datasets
ChIP EM-3 GSE128834.SPI1.EM-3 186 bp overlap
ChIP GM12878 ENCFF134LCP 122 bp overlap
ChIP GM12891 ENCFF563IUT 142 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 102 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 135 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 157 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 69 bp overlap
STAT1 3 datasets
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
Motif DE_72h DE_72h-STAT1_MA0137.4 9 bp overlap
Stat5a 3 datasets
Motif DE_48h DE_48h-Stat5a_MA1624.2 9 bp overlap
Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap
Motif DE_72h DE_72h-Stat5a_MA1624.2 9 bp overlap
TAL1 2 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 255 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 171 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 241 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 164 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TFAP2A 3 datasets
Motif DE_48h DE_48h-TFAP2A_MA0810.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0810.2 11 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 253 bp overlap
TFAP2B 2 datasets
Motif DE_48h DE_48h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 3 datasets
Motif DE_48h DE_48h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0524.3 11 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 195 bp overlap
TFAP2E 2 datasets
Motif DE_48h DE_48h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_60h DE_60h-TFAP2E_MA1569.2 9 bp overlap
ZBTB11 3 datasets
Motif DE_48h DE_48h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_60h DE_60h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_72h DE_72h-ZBTB11_MA2329.1 9 bp overlap
ZBTB32 2 datasets
Motif DE_48h DE_48h-ZBTB32_MA1580.1 10 bp overlap
Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap
ZBTB7A 3 datasets
Motif DE_48h DE_48h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_60h DE_60h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_72h DE_72h-ZBTB7A_MA0750.3 9 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 108 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 361 bp overlap
ZNF558 3 datasets
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF770 3 datasets
Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap