chr2 : 143,692,027 – 143,692,683

656 bp 81 TFs 1 linked gene

This 656 bp open chromatin element is linked to ENSG00000257277 and is bound by 81 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000257277		9.2 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

81 transcription factors

AR 2 datasets

ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 134 bp overlap

ChIP LNCaP_M253K_shFOXA1_Ethanol GSE128883.AR.LNCaP_M253K_shFOXA1_Ethanol 186 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 513 bp overlap

BRD4 3 datasets

ChIP HEK293T GSE51633.BRD4.HEK293T 279 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 279 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 484 bp overlap

CTCF 2 datasets

ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 226 bp overlap

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 158 bp overlap

Dmrt1 1 dataset

Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 221 bp overlap

FOXA1 2 datasets

Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 228 bp overlap

FOXA2 1 dataset

Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap

FOXA3 1 dataset

Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap

FOXD1 1 dataset

Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap

FOXF2 1 dataset

Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap

FOXG1 1 dataset

Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap

FOXI1 1 dataset

Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap

FOXK1 1 dataset

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP1 1 dataset

Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

FOXP4 1 dataset

Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap

FOXS1 1 dataset

Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap

Foxj3 1 dataset

Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 348 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 434 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 549 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 556 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 577 bp overlap

HOXB4 1 dataset

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 367 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 317 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 380 bp overlap

KMT2A 3 datasets

ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 417 bp overlap

ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 385 bp overlap

ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 257 bp overlap

KMT2B 1 dataset

ChIP HEK293T_C-term_C104 GSE90762.KMT2B.HEK293T_C-term_C104 274 bp overlap

MAZ 1 dataset

ChIP HEK293 GSE76494.MAZ.HEK293 155 bp overlap

MGA::EVX1 1 dataset

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 589 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 309 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap

NR1I2 1 dataset

Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 326 bp overlap

Nr2e3 2 datasets

Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap

PHIP 2 datasets

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 184 bp overlap

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 302 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 420 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RNF2 1 dataset

ChIP A-549 ENCSR798EGJ.RNF2.A-549 332 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 592 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 483 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 385 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 555 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 423 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 264 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 412 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 387 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 294 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 448 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 324 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 337 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 393 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 446 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 319 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX18 1 dataset

Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

Stat6 1 dataset

Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 212 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 349 bp overlap

TAL1 1 dataset

ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap

WT1 1 dataset

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 207 bp overlap

YY1 2 datasets

ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 317 bp overlap

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 559 bp overlap

ZFP57 2 datasets

Motif DE_12h DE_12h-ZFP57_MA1583.2 7 bp overlap

ChIP hESC GSE115387.ZFP57.hESC 252 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 194 bp overlap

ZKSCAN2 1 dataset

ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 293 bp overlap

ZNF335 3 datasets

ChIP HEK293 ENCFF784SLD 495 bp overlap

ChIP HEK293 ENCFF784SLD 290 bp overlap

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 633 bp overlap

ZNF343 1 dataset

Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap

ZNF35 1 dataset

ChIP HEK293 GSE76494.ZNF35.HEK293 498 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF574 1 dataset

ChIP HEK293 GSE76494.ZNF574.HEK293 146 bp overlap

ZNF692 1 dataset

ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 231 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

ZNF8 1 dataset

Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap

ZSCAN31 1 dataset

Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap