chr2 : 108,531,069 108,531,657
588 bp 48 TFs 2 linked genes
This 588 bp open chromatin element is linked to GCC2-AS1 and LIMS1 and is bound by 48 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GCC2-AS1 2.5 kb Proximal Proximity
LIMS1 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:108,526,069 – 108,536,657
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 399 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 147 bp overlap
BRD2 2 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 246 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 256 bp overlap
BRD4 3 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 226 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 211 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 195 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 443 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 467 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 287 bp overlap
ChIP BLaER1 ENCFF274GAT 305 bp overlap
ChIP BLaER1 ENCFF460KDD 264 bp overlap
DDX20 1 dataset
ChIP K562 ENCFF373BEC 66 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 176 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 334 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 361 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF996TSW 165 bp overlap
GATA1 4 datasets
ChIP erythroblast ENCFF867JAR 223 bp overlap
ChIP erythroblast ENCFF867JAR 428 bp overlap
ChIP erythroblast ENCFF867JAR 64 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 307 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 574 bp overlap
ChIP DE DE-GATA4-2 448 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 424 bp overlap
ChIP DE DE-GATA6-2 500 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 435 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 333 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 398 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 269 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 376 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 130 bp overlap
IRF1 2 datasets
ChIP K562 ENCFF277KTJ 219 bp overlap
ChIP K562 ENCFF277KTJ 427 bp overlap
IRF2 1 dataset
ChIP K562 ENCFF248LJZ 68 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 80 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF809XHP 58 bp overlap
MLLT1 4 datasets
ChIP GM12878 ENCFF995GXC 392 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 298 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 191 bp overlap
ChIP K562 ENCFF074XRJ 353 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 388 bp overlap
NR2C1 4 datasets
ChIP GM12878 ENCFF101ELO 171 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 134 bp overlap
ChIP K562 ENCFF568JLK 284 bp overlap
ChIP K562 ENCFF568JLK 411 bp overlap
NR2C2 3 datasets
ChIP K562 ENCFF750AXF 588 bp overlap
ChIP K562 ENCFF750AXF 588 bp overlap
ChIP K562 ENCFF750AXF 446 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 248 bp overlap
ChIP K562 ENCFF221HJH 311 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 343 bp overlap
PTTG1 2 datasets
ChIP K-562 ENCSR314BBS.PTTG1.K-562 133 bp overlap
ChIP K562 ENCFF017KRM 215 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 433 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 175 bp overlap
ChIP K562 ENCFF506JCB 404 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 365 bp overlap
TAF7 1 dataset
ChIP K562 ENCFF314WLE 121 bp overlap
YY1 4 datasets
ChIP GM12878 ENCFF908JTL 168 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 220 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 205 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 60 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 468 bp overlap
ZBTB4 2 datasets
ChIP HepG2 ENCFF828GZH 512 bp overlap
ChIP HepG2 ENCFF828GZH 303 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 141 bp overlap
ZFX 3 datasets
ChIP HEK293T ENCFF402JZW 399 bp overlap
ChIP K562 ENCFF536AJO 506 bp overlap
ChIP K562 ENCFF536AJO 307 bp overlap
ZNF316 2 datasets
ChIP K562 ENCFF281INV 257 bp overlap
ChIP K562 ENCFF281INV 456 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 117 bp overlap
ChIP K562 ENCFF547OSS 283 bp overlap
ZNF598 1 dataset
ChIP HepG2 ENCFF356UIO 424 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 303 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 140 bp overlap
ChIP HepG2 ENCFF653WIX 544 bp overlap