chr2 : 49,235,942 – 49,236,861

919 bp 72 TFs 0 linked genes

This 919 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

72 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 238 bp overlap

ATF2 2 datasets

ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 312 bp overlap

ChIP HepG2 ENCFF955VER 381 bp overlap

BRD4 1 dataset

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 502 bp overlap

CREB1 2 datasets

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 285 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 249 bp overlap

CTCF 1 dataset

ChIP GSC23 GSE139416.CTCF.GSC23 297 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF346MCV 291 bp overlap

DPRX 1 dataset

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

DUX4 2 datasets

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 271 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

Dux 1 dataset

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EHF 1 dataset

Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 479 bp overlap

ETV3 1 dataset

Motif DE_60h DE_60h-ETV3_MA0763.2 9 bp overlap

EZH2 1 dataset

ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap

Erg 1 dataset

Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 599 bp overlap

ChIP DE DE-FOXA2-2 556 bp overlap

GABPA 1 dataset

Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap

GATA1 1 dataset

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

GATA2 3 datasets

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 202 bp overlap

GATA3 1 dataset

ChIP BE2C GSE65664.GATA3.BE2C 158 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 642 bp overlap

ChIP DE DE-GATA4-2 741 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 384 bp overlap

GATA5 2 datasets

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 512 bp overlap

ChIP DE DE-GATA6-2 729 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 692 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 452 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 281 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 478 bp overlap

ChIP foregut GSE117136.GATA6.foregut 283 bp overlap

GFI1 1 dataset

Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap

Gata3 2 datasets

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 197 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 160 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 341 bp overlap

MEIS1 4 datasets

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

Mecom 2 datasets

Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 179 bp overlap

NFATC3 2 datasets

Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NFATC4 2 datasets

Motif DE_48h DE_48h-NFATC4_MA1525.3 9 bp overlap

Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap

NFYA 1 dataset

Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap

NFYC 1 dataset

Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap

NR4A1 2 datasets

Motif DE_48h DE_48h-NR4A1_MA1112.3 8 bp overlap

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

NR4A2 2 datasets

Motif DE_48h DE_48h-NR4A2_MA0160.3 8 bp overlap

Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap

Nfat5 2 datasets

Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 2 datasets

Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 2 datasets

Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

PBX3 2 datasets

Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap

Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap

POU2F1 1 dataset

ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 153 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 95 bp overlap

Prdm5 2 datasets

Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap

Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 289 bp overlap

SMAD2-3 2 datasets

ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 220 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 542 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 496 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 550 bp overlap

SMARCA4 1 dataset

ChIP NGP GSE134626.SMARCA4.NGP 287 bp overlap

SOX13 1 dataset

Motif DE_60h DE_60h-SOX13_MA1120.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 317 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 393 bp overlap

SOX2 1 dataset

Motif DE_60h DE_60h-SOX2_MA0143.5 7 bp overlap

SOX9 1 dataset

Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap

SPI1 1 dataset

ChIP NB4 GSE128834.SPI1.NB4 104 bp overlap

SREBF2 1 dataset

Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap

STAT3 1 dataset

ChIP HepaRG_sodium-oleate GSE89157.STAT3.HepaRG_sodium-oleate 61 bp overlap

Sox3 1 dataset

Motif DE_60h DE_60h-Sox3_MA0514.3 7 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 292 bp overlap

TP63 2 datasets

Motif DE_48h DE_48h-TP63_MA0525.2 18 bp overlap

Motif DE_60h DE_60h-TP63_MA0525.2 18 bp overlap

TRPS1 2 datasets

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB11 1 dataset

Motif DE_60h DE_60h-ZBTB11_MA2329.1 9 bp overlap

ZFP42 2 datasets

Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap

Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap

ZNF175 1 dataset

Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap

ZNF19 1 dataset

ChIP HEK293T GSE78099.ZNF19.HEK293T 493 bp overlap

ZNF205 1 dataset

ChIP HEK293T GSE78099.ZNF205.HEK293T 169 bp overlap

ZNF211 1 dataset

Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap

ZNF24 1 dataset

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

ZNF35 2 datasets

Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap

Motif DE_60h DE_60h-ZNF35_MA2333.1 7 bp overlap

ZNF547 2 datasets

Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap

Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap

Zbtb2 1 dataset

Motif DE_60h DE_60h-Zbtb2_MA2340.1 10 bp overlap