chr2 : 39,707,087 39,707,565
478 bp 47 TFs 0 linked genes
This 478 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:39,702,087 – 39,712,565
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 121 bp overlap
Arnt 1 dataset
Motif DE_36h DE_36h-Arnt_MA0004.1 6 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 130 bp overlap
ChIP BLaER1 ENCFF460KDD 157 bp overlap
ELF1 2 datasets
ChIP A-549 GSE122203.ELF1.A-549 144 bp overlap
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 136 bp overlap
ESR1 3 datasets
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 162 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 206 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 294 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 259 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 201 bp overlap
HES2 1 dataset
Motif DE_36h DE_36h-HES2_MA0616.3 9 bp overlap
HES5 1 dataset
Motif DE_36h DE_36h-HES5_MA0821.2 10 bp overlap
HEY1 1 dataset
Motif DE_36h DE_36h-HEY1_MA0823.1 10 bp overlap
HEY2 1 dataset
Motif DE_36h DE_36h-HEY2_MA0649.2 9 bp overlap
HIF1A 2 datasets
Motif DE_36h DE_36h-HIF1A_MA1106.2 6 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 56 bp overlap
MAX 1 dataset
Motif DE_36h DE_36h-MAX_MA0058.4 6 bp overlap
MAX::MYC 1 dataset
Motif DE_36h DE_36h-MAXMYC_MA0059.2 10 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
MLX 1 dataset
Motif DE_36h DE_36h-MLX_MA0663.1 10 bp overlap
MLXIPL 1 dataset
Motif DE_36h DE_36h-MLXIPL_MA0664.2 8 bp overlap
MNT 5 datasets
Motif DE_36h DE_36h-MNT_MA0825.2 6 bp overlap
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 264 bp overlap
ChIP HepG2 ENCFF701PYP 212 bp overlap
ChIP MCF-7 ENCFF144ZFZ 296 bp overlap
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 235 bp overlap
MYC 2 datasets
Motif DE_36h DE_36h-MYC_MA0147.4 8 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 163 bp overlap
MYCN 3 datasets
Motif DE_36h DE_36h-MYCN_MA0104.5 8 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 166 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 129 bp overlap
Mlxip 1 dataset
Motif DE_36h DE_36h-Mlxip_MA0622.2 6 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 97 bp overlap
Npas2 1 dataset
Motif DE_36h DE_36h-Npas2_MA0626.2 8 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 132 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 191 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 144 bp overlap
SOHLH2 1 dataset
Motif DE_36h DE_36h-SOHLH2_MA1560.2 8 bp overlap
SP4 1 dataset
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 192 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TCF3 1 dataset
Motif DE_36h DE_36h-TCF3_MA0522.4 7 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_36h DE_36h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
THRB 1 dataset
Motif DE_36h DE_36h-THRB_MA1575.2 17 bp overlap
ZNF157 1 dataset
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
ZNF189 1 dataset
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
ZNF263 1 dataset
Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap