chr2 : 30,548,473 30,549,371
898 bp 85 TFs 0 linked genes
This 898 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:30,543,473 – 30,554,371
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
BARX2 1 dataset
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
Bcl11B 1 dataset
Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap
CDX4 1 dataset
Motif DE_72h DE_72h-CDX4_MA1473.2 9 bp overlap
CUX1 1 dataset
Motif DE_48h DE_48h-CUX1_MA0754.3 9 bp overlap
CUX2 1 dataset
Motif DE_48h DE_48h-CUX2_MA0755.2 9 bp overlap
DUX4 1 dataset
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Dux 1 dataset
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 322 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
ChIP hESC GSE26097.EOMES.hESC 331 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 221 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 362 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 103 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 206 bp overlap
ChIP DE DE-FOXA2-1 898 bp overlap
ChIP DE DE-FOXA2-2 898 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 357 bp overlap
FOXG1 1 dataset
Motif DE_72h DE_72h-FOXG1_MA0613.1 8 bp overlap
FOXN3 1 dataset
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 177 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 177 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 172 bp overlap
ChIP SK-N-SH ENCFF764OZD 379 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 156 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 228 bp overlap
GATA3 2 datasets
ChIP SH-SY5Y ENCFF475HYF 429 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 194 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 898 bp overlap
ChIP DE DE-GATA4-2 898 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 299 bp overlap
ChIP foregut GSE117136.GATA4.foregut 465 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 898 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 712 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 19 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 278 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 278 bp overlap
ChIP DE DE-GATA6-1 898 bp overlap
ChIP DE DE-GATA6-2 898 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 898 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 898 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 898 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 898 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 898 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 898 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 883 bp overlap
ChIP foregut GSE117136.GATA6.foregut 546 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 440 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 856 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 873 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 473 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 189 bp overlap
HIC2 1 dataset
Motif DE_72h DE_72h-HIC2_MA0738.2 6 bp overlap
HNF1A 1 dataset
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif DE_48h DE_48h-HNF1B_MA0153.2 13 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 60 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 162 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 289 bp overlap
ISL2 1 dataset
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 260 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 381 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 333 bp overlap
LIN54 1 dataset
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
MAFF 3 datasets
ChIP HepG2 ENCFF452YUT 215 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 141 bp overlap
ChIP K562 ENCFF071YKK 219 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 223 bp overlap
ChIP K562 ENCFF455EEO 306 bp overlap
MAFK 5 datasets
ChIP A549 ENCFF371EPR 283 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 165 bp overlap
ChIP HepG2 ENCFF743ZOF 124 bp overlap
ChIP HepG2 ENCFF767LDG 206 bp overlap
ChIP IMR-90 ENCFF336DHZ 221 bp overlap
MEIS1 6 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA1639.2 9 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_48h DE_48h-MEIS2_MA1640.2 9 bp overlap
MEIS3 4 datasets
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
Motif DE_48h DE_48h-MEIS3_MA0775.2 7 bp overlap
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
Motif DE_72h DE_72h-MEIS3_MA0775.2 7 bp overlap
MITF 1 dataset
Motif DE_72h DE_72h-MITF_MA0620.4 10 bp overlap
MXI1 1 dataset
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NFIL3 1 dataset
Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap
NFYB 4 datasets
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap
Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
Nkx3-2 1 dataset
Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap
Nr2e3 1 dataset
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
ONECUT1 2 datasets
Motif DE_48h DE_48h-ONECUT1_MA0679.3 9 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 257 bp overlap
PAX3 1 dataset
Motif DE_48h DE_48h-PAX3_MA0780.1 10 bp overlap
PBX2 1 dataset
Motif DE_48h DE_48h-PBX2_MA1113.3 9 bp overlap
PDX1 5 datasets
ChIP H9 ERP004206.PDX1.H9 243 bp overlap
ChIP hESC GSE58685.PDX1.hESC 265 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 357 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 376 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 438 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 237 bp overlap
Pax7 1 dataset
Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap
RARA 2 datasets
Motif DE_72h DE_72h-RARA_MA0730.1 17 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 297 bp overlap
RARB 1 dataset
Motif DE_72h DE_72h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif DE_72h DE_72h-RARG_MA1553.2 13 bp overlap
RXRB 1 dataset
Motif DE_72h DE_72h-RXRB_MA1555.1 14 bp overlap
Rarb 1 dataset
Motif DE_72h DE_72h-Rarb_MA0858.1 17 bp overlap
Rarg 1 dataset
Motif DE_72h DE_72h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 291 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 426 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 264 bp overlap
SMAD2_3 7 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 280 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 314 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 374 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 454 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 898 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 870 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 164 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 474 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 291 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 324 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 366 bp overlap
SOX21 1 dataset
Motif DE_48h DE_48h-SOX21_MA0866.1 15 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
Sox1 1 dataset
Motif DE_48h DE_48h-Sox1_MA0870.1 15 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 371 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 244 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 202 bp overlap
TFAP2B 3 datasets
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_72h DE_72h-TFAP2B_MA0811.2 11 bp overlap
ChIP SK-N-SH ENCFF869XXQ 350 bp overlap
THRA 1 dataset
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
USF1 1 dataset
Motif DE_72h DE_72h-USF1_MA0093.4 10 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 151 bp overlap
ZNF384 1 dataset
Motif DE_72h DE_72h-ZNF384_MA1125.2 8 bp overlap
ZNF530 2 datasets
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF558 2 datasets
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF680 4 datasets
Motif DE_36h DE_36h-ZNF680_MA1729.2 11 bp overlap
Motif DE_48h DE_48h-ZNF680_MA1729.2 11 bp overlap
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
Motif DE_72h DE_72h-ZNF680_MA1729.2 11 bp overlap