chrX : 151,973,134 – 151,973,294

160 bp 59 TFs 1 linked gene

This 160 bp open chromatin element is linked to GABRE and is bound by 59 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
GABRE		1.4 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

59 transcription factors

AFF1 2 datasets

ChIP K-562 ENCSR426URK.AFF1.K-562 125 bp overlap

ChIP K-562 ENCSR241LIH.AFF1.K-562 107 bp overlap

ARID4A 1 dataset

ChIP Hep-G2 ENCSR386UBO.ARID4A.Hep-G2 160 bp overlap

ATF4 1 dataset

ChIP K-562 ENCSR145TSJ.ATF4.K-562 57 bp overlap

BRD4 3 datasets

ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 160 bp overlap

ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 160 bp overlap

ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 160 bp overlap

CBFA2T3 1 dataset

ChIP K562 ENCFF673OEZ 144 bp overlap

CHD1 2 datasets

ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 124 bp overlap

ChIP K-562 ENCSR000AQD.CHD1.K-562 160 bp overlap

ELF3 2 datasets

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 160 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 160 bp overlap

ERF::FIGLA 1 dataset

Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

FOS 1 dataset

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 160 bp overlap

HDAC1 3 datasets

ChIP K-562 ENCSR387UWP.HDAC1.K-562 160 bp overlap

ChIP K-562 ENCSR711VWL.HDAC1.K-562 127 bp overlap

ChIP K-562 ENCSR000AQF.HDAC1.K-562 105 bp overlap

HDAC2 2 datasets

ChIP K-562 ENCSR893WSB.HDAC2.K-562 125 bp overlap

ChIP K-562 ENCSR075HTM.HDAC2.K-562 92 bp overlap

HDGF 1 dataset

ChIP K-562 ENCSR197ALX.HDGF.K-562 128 bp overlap

HMGXB4 1 dataset

ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 160 bp overlap

KLF6 1 dataset

ChIP PDAC GSE64557.KLF6.PDAC 160 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MIER1 2 datasets

ChIP K-562 ENCSR426MDV.MIER1.K-562 160 bp overlap

ChIP K562 ENCFF584AYC 160 bp overlap

MLLT1 2 datasets

ChIP K-562 ENCSR675LRO.MLLT1.K-562 154 bp overlap

ChIP K562 ENCFF074XRJ 79 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 91 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 154 bp overlap

NFE2L2 1 dataset

ChIP A-549 GSE113497.NFE2L2.A-549 160 bp overlap

NR2F1 1 dataset

ChIP K-562 ENCSR970NKQ.NR2F1.K-562 121 bp overlap

POLR2A 1 dataset

ChIP HeLa-S3 ENCFF773DNG 114 bp overlap

POU5F1 3 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 87 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 120 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 130 bp overlap

PTBP1 2 datasets

ChIP K-562 GSE120104.PTBP1.K-562 160 bp overlap

ChIP K-562 ENCSR948KMB.PTBP1.K-562 160 bp overlap

RAD21 1 dataset

ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 133 bp overlap

RBBP5 1 dataset

ChIP K-562 ENCSR000AQI.RBBP5.K-562 96 bp overlap

RBFOX2 2 datasets

ChIP K562 ENCFF196WTG 59 bp overlap

ChIP K562 ENCFF967GRF 58 bp overlap

RBM25 3 datasets

ChIP K-562 ENCSR791OZM.RBM25.K-562 96 bp overlap

ChIP K562 ENCFF248CGR 160 bp overlap

ChIP K562 ENCFF957ORK 160 bp overlap

RBM39 2 datasets

ChIP K-562 ENCSR764OXF.RBM39.K-562 160 bp overlap

ChIP K-562 GSE120104.RBM39.K-562 160 bp overlap

RFX5 3 datasets

ChIP HeLa-S3 ENCFF703XPB 160 bp overlap

ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 157 bp overlap

ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 160 bp overlap

RFX7 1 dataset

Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap

Rfx6 1 dataset

Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap

SAP30 1 dataset

ChIP K-562 ENCSR000AQJ.SAP30.K-562 60 bp overlap

SMAD3 1 dataset

ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 160 bp overlap

SMAD5 1 dataset

ChIP K-562 ENCSR000FCD.SMAD5.K-562 160 bp overlap

SMARCA4 1 dataset

ChIP K-562 ENCSR587OQL.SMARCA4.K-562 160 bp overlap

STAT1 1 dataset

ChIP K-562 ENCSR000FAU.STAT1.K-562 88 bp overlap

STAT2 1 dataset

ChIP K-562 ENCSR000FBC.STAT2.K-562 130 bp overlap

SUPT5H 1 dataset

ChIP K562 ENCFF902PAW 160 bp overlap

TAF1 1 dataset

ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 146 bp overlap

TCF12 1 dataset

ChIP A-549 ENCSR000BQQ.TCF12.A-549 54 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

TP63 1 dataset

ChIP SUIT-2 GSE115461.TP63.SUIT-2 57 bp overlap

VEZF1 1 dataset

ChIP K562 ENCFF053XDV 119 bp overlap

XRCC5 2 datasets

ChIP K-562 ENCSR506KWJ.XRCC5.K-562 160 bp overlap

ChIP K-562 GSE120104.XRCC5.K-562 160 bp overlap

ZBTB40 1 dataset

ChIP K-562 ENCSR237VLT.ZBTB40.K-562 115 bp overlap

ZBTB7A 1 dataset

ChIP K-562 GSE103445.ZBTB7A.K-562 60 bp overlap

ZBTB7B 1 dataset

ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 52 bp overlap

ZEB2 1 dataset

ChIP K-562 ENCSR004GKA.ZEB2.K-562 74 bp overlap

ZFY 1 dataset

ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 119 bp overlap

ZGPAT 1 dataset

ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 160 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF148 2 datasets

ChIP K-562 ENCSR018MSO.ZNF148.K-562 127 bp overlap

ChIP K562 ENCFF352SDL 160 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 160 bp overlap

ZNF3 1 dataset

ChIP K-562 ENCSR195QFV.ZNF3.K-562 106 bp overlap

ZNF629 1 dataset

ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 108 bp overlap

ZNF675 1 dataset

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

Znf423 1 dataset

Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap