chr2 : 25,160,022 – 25,160,255
233 bp 42 TFs 1 linked gene
This 233 bp open chromatin element is linked to POMC and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
POMC 8.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:25,155,022 – 25,165,255
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 69 bp overlap
BCL11A 6 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 118 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 105 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 57 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 56 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 84 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 166 bp overlap
BRD4 2 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 157 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 212 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 233 bp overlap
CTCF 67 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 185 bp overlap
ChIP A549 ENCFF034FVO 233 bp overlap
ChIP AG04450 ENCFF116DJL 203 bp overlap
ChIP BE2C ENCFF757SRF 202 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 171 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 205 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 159 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 170 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 177 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 173 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 131 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 127 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 106 bp overlap
ChIP GM12873 ENCFF711LOS 211 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 112 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 115 bp overlap
ChIP H1 ENCFF230QSV 158 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 203 bp overlap
ChIP H9 ENCFF152GTF 158 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 229 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 211 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 113 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 161 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 123 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 181 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 170 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 133 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 143 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 167 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 186 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 108 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 105 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 149 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 132 bp overlap
ChIP K-562_Dox GSE92879.CTCF.K-562_Dox 82 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 233 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 177 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 180 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 205 bp overlap
ChIP SEM GSE117864.CTCF.SEM 157 bp overlap
ChIP SK-N-SH ENCFF575DMG 233 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 233 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 173 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 212 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 140 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 174 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 225 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 108 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 212 bp overlap
ChIP endodermal cell ENCFF471YCZ 174 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 151 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 164 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 233 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 233 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 159 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 233 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 174 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 145 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 203 bp overlap
ChIP neural progenitor cell ENCFF420RBO 233 bp overlap
ChIP neural progenitor cell ENCFF581WPG 233 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 233 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 223 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 233 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 122 bp overlap
CTCFL 2 datasets
ChIP K-562 ENCSR000BNK.CTCFL.K-562 132 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 207 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 233 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 136 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 141 bp overlap
ESR1 1 dataset
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 56 bp overlap
FOS 2 datasets
ChIP MCF-7 ENCFF282FWZ 233 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 206 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 168 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 189 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 233 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 233 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 233 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 172 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 233 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 233 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 233 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 157 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 233 bp overlap
JUND 1 dataset
ChIP A-549 ENCSR000BRF.JUND.A-549 115 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 230 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 157 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR163IUV.MAZ.K-562 115 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 189 bp overlap
ChIP MCF-7 ENCSR288IJC.MAZ.MCF-7 206 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 216 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 146 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 230 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
NR2C2 2 datasets
ChIP K562 ENCFF750AXF 233 bp overlap
ChIP K562 ENCFF750AXF 233 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 176 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 232 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 233 bp overlap
POLR2A 4 datasets
ChIP GM12891 ENCFF012SUT 233 bp overlap
ChIP GM12891 ENCFF379FCI 233 bp overlap
ChIP GM12892 ENCFF506PGQ 233 bp overlap
ChIP GM18505 ENCFF311CYB 233 bp overlap
RAD21 1 dataset
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 170 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 214 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 233 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 94 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 196 bp overlap
TAF1 1 dataset
ChIP GM12891 ENCFF254YPA 212 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 189 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 173 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 162 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 233 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 209 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 168 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 233 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 233 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 129 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 197 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 198 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 233 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 165 bp overlap
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