chr21 : 45,580,682 45,580,990
308 bp 55 TFs 1 linked gene
This 308 bp open chromatin element is linked to LINC01694 and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01694 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:45,575,682 – 45,585,990
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 119 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 214 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 130 bp overlap
BRD4 3 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 293 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 62 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 169 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 143 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 226 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 200 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 251 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 308 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 308 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 182 bp overlap
ESR1 27 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 226 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 266 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 212 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 308 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 308 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 308 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 266 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 308 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 126 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 308 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 200 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 308 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 287 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 308 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 308 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 238 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 308 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 308 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 308 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 308 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 308 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 300 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 308 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 308 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 308 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 192 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 297 bp overlap
FOSL2 1 dataset
ChIP LPS141 GSE111253.FOSL2.LPS141 170 bp overlap
GATA6 5 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 222 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 308 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 295 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 308 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 308 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 244 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 308 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 115 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 308 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 308 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 308 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 176 bp overlap
ChIP K562 ENCFF320EQC 305 bp overlap
MAFK 1 dataset
ChIP WA01 ENCSR000EBS.MAFK.WA01 136 bp overlap
MAX 5 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 140 bp overlap
ChIP Ishikawa ENCFF064TDQ 150 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 297 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 308 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 276 bp overlap
MCM5 1 dataset
ChIP K-562 ENCSR628APV.MCM5.K-562 116 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 246 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 253 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 267 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 156 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 308 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 274 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 211 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 110 bp overlap
ChIP K562 ENCFF047YKA 252 bp overlap
NFE2L2 3 datasets
ChIP A-549 ENCSR584GHV.NFE2L2.A-549 122 bp overlap
ChIP A-549 GSE113497.NFE2L2.A-549 110 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 160 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 305 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 270 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 239 bp overlap
PLAG1 2 datasets
ChIP K-562 GSE111469.PLAG1.K-562 92 bp overlap
ChIP K-562 GSE111469.PLAG1.K-562 98 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 276 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 68 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 195 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 295 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 308 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 302 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 308 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 308 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 308 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 203 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 308 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 168 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 308 bp overlap
SRF 1 dataset
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 166 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 283 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 224 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 211 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 162 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 232 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 308 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 274 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 286 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 224 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 214 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 197 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 179 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 244 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 308 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 79 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 308 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 200 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 58 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 298 bp overlap