chr21 : 19,120,412 19,120,914
502 bp 93 TFs 0 linked genes
This 502 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:19,115,412 – 19,125,914
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 327 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 398 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 163 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 135 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 267 bp overlap
BRD4 2 datasets
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 180 bp overlap
ChIP hESC GSE33281.BRD4.hESC 91 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 171 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 302 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 165 bp overlap
ChIP hESC GSE17917.EP300.hESC 295 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 243 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
Foxq1 1 dataset
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
GLIS2 1 dataset
Motif ES_0h ES_0h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 212 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 237 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HNF1A 1 dataset
Motif ES_0h ES_0h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif ES_0h ES_0h-HNF1B_MA0153.2 13 bp overlap
HOXA3 1 dataset
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap
HOXA6 1 dataset
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB4 2 datasets
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXB6 1 dataset
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXC4 2 datasets
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD3 1 dataset
Motif ES_0h ES_0h-HOXD3_MA0912.2 8 bp overlap
HOXD4 2 datasets
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
HOXD8 1 dataset
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 239 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 283 bp overlap
KLF4 1 dataset
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 264 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 258 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 502 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 435 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 276 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 502 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 489 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 406 bp overlap
ChIP hESC GSE20650.NANOG.hESC 302 bp overlap
ChIP hESC GSE18292.NANOG.hESC 183 bp overlap
NIPBL 4 datasets
ChIP WA09 GSE105028.NIPBL.WA09 285 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 183 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 243 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 203 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NR1D2 1 dataset
Motif ES_0h ES_0h-NR1D2_MA1532.2 15 bp overlap
NR1I3 1 dataset
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 258 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 13 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 481 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 354 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 502 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 247 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 248 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 293 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 306 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 245 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 411 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 457 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 309 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 235 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 419 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 296 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 443 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 295 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
Rfx6 1 dataset
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 252 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 318 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 333 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 336 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 417 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 314 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 433 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 344 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 6 datasets
ChIP H9 GSE46837.SOX2.H9 156 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 307 bp overlap
ChIP hESC GSE69479.SOX2.hESC 284 bp overlap
ChIP hESC GSE18292.SOX2.hESC 164 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 367 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 423 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 163 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 232 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 444 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 498 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 385 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 216 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 182 bp overlap
VEZF1 1 dataset
Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 61 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 187 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 334 bp overlap