chr21 : 14,063,608 – 14,064,106
498 bp 52 TFs 4 linked genes
This 498 bp open chromatin element is linked to 4 target genes and is bound by 52 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ANKRD20A18P 217 bp At TSS Proximity
ENSG00000224905 36.6 kb Distal Multiome
ANKRD20A11P 83.5 kb Distal Multiome+HiCAR
ENSG00000290581 128.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:14,058,608 – 14,069,106
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 132 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 234 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 406 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 406 bp overlap
ARNT 2 datasets
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 412 bp overlap
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 413 bp overlap
Ahr::Arnt 2 datasets
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_72h DE_72h-AhrArnt_MA0006.2 5 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 173 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 285 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 228 bp overlap
BRCA1 1 dataset
ChIP SH-EP_MYCNER_plusOHT GSE111905.BRCA1.SH-EP_MYCNER_plusOHT 103 bp overlap
BRD4 6 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 164 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 341 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 367 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 224 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 261 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 263 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 274 bp overlap
CTCF 23 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 257 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 151 bp overlap
ChIP GM23338 ENCFF772DML 185 bp overlap
ChIP MCF-7 ENCFF162GNE 207 bp overlap
ChIP MCF-7 ENCFF210JUZ 319 bp overlap
ChIP MCF-7 ENCFF414SZG 184 bp overlap
ChIP MCF-7 ENCFF424NQR 176 bp overlap
ChIP MCF-7 ENCFF844STM 175 bp overlap
ChIP MCF-7 ENCFF954TUV 198 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 188 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 120 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 103 bp overlap
ChIP OCI-LY1 ENCFF455ESK 321 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 262 bp overlap
ChIP Panc1 ENCFF056JQX 420 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 130 bp overlap
ChIP SK-N-SH ENCFF731NJX 215 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 332 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 356 bp overlap
ChIP brain ENCFF099ASU 414 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 498 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 217 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 233 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 248 bp overlap
E2F1 3 datasets
ChIP MCF-7 ENCFF692OYJ 464 bp overlap
ChIP MCF-7 ENCFF692OYJ 265 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 351 bp overlap
ELF1 5 datasets
ChIP MCF-7 ENCFF305BNP 184 bp overlap
ChIP MCF-7 ENCFF366KVK 373 bp overlap
ChIP MCF-7 ENCFF687CWI 177 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 197 bp overlap
ChIP SK-N-SH ENCFF871YHY 296 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 287 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 334 bp overlap
ESR1 11 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 411 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 291 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 233 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 184 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 169 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 228 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 211 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 203 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 187 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 169 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 214 bp overlap
GABPA 1 dataset
ChIP MCF-7 ENCFF735CHO 366 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 350 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 215 bp overlap
MAX 4 datasets
ChIP MCF-7 ENCFF169IXS 231 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 248 bp overlap
ChIP SK-N-SH ENCFF285LXR 360 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 167 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 106 bp overlap
MED1 2 datasets
ChIP MCF-7_SHCTR GSE60270.MED1.MCF-7_SHCTR 156 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 158 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCFF144ZFZ 369 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 157 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 185 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 330 bp overlap
MYC 6 datasets
ChIP Jurkat GSE83777.MYC.Jurkat 192 bp overlap
ChIP MCF-7 ENCFF394LGD 249 bp overlap
ChIP MCF-7 ENCFF542NWJ 201 bp overlap
ChIP MCF-7 ENCFF767RTQ 205 bp overlap
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 258 bp overlap
ChIP MCF-7 ENCSR000DMP.MYC.MCF-7 162 bp overlap
MYCN 6 datasets
ChIP Kelly GSE94782.MYCN.Kelly 128 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 221 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 159 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 167 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 153 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 167 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 438 bp overlap
POLR2A 4 datasets
ChIP MCF-7 ENCFF164XWP 209 bp overlap
ChIP MCF-7 ENCFF309IKZ 137 bp overlap
ChIP MCF-7 ENCFF411WCU 171 bp overlap
ChIP Panc1 ENCFF290KAB 102 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 494 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 452 bp overlap
RAD21 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 106 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 370 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 365 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE76181.RUNX1.Jurkat 173 bp overlap
SIN3A 1 dataset
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 223 bp overlap
SMAD2_3 1 dataset
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 270 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 345 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 337 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 380 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 267 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 203 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 237 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 161 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 366 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 261 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 384 bp overlap
SNIP1 1 dataset
ChIP MCF-7 ENCFF261BIX 260 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 260 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 345 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 263 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 301 bp overlap
TCFL5 2 datasets
Motif DE_60h DE_60h-TCFL5_MA0632.3 8 bp overlap
Motif DE_72h DE_72h-TCFL5_MA0632.3 8 bp overlap
TFAP2A 2 datasets
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_72h DE_72h-TFAP2C_MA0814.3 9 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 56 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 147 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 217 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 333 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 301 bp overlap
ZNF549 2 datasets
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap
ZNF687 1 dataset
ChIP MCF-7 ENCFF440BFX 437 bp overlap
ZNF76 2 datasets
Motif DE_60h DE_60h-ZNF76_MA1716.2 17 bp overlap
Motif DE_72h DE_72h-ZNF76_MA1716.2 17 bp overlap
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