chr20 : 8,359,972 – 8,360,421

449 bp 75 TFs 0 linked genes

This 449 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

75 transcription factors

AFF1 1 dataset

ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 249 bp overlap

BRD3 1 dataset

ChIP H-1_DE GSE126661.BRD3.H-1_DE 360 bp overlap

CDX2 1 dataset

ChIP LS180 GSE31939.CDX2.LS180 121 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 288 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 247 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF093OYK 251 bp overlap

DMRTC2 1 dataset

Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap

EBF1 5 datasets

ChIP GM12878 ENCFF167CZS 321 bp overlap

ChIP GM12878 ENCFF813OXE 265 bp overlap

ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 188 bp overlap

ChIP MUTUL GSE75503.EBF1.MUTUL 387 bp overlap

ChIP NALM-6 GSE126300.EBF1.NALM-6 335 bp overlap

EHF 1 dataset

Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap

ELF1 2 datasets

Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap

ChIP GM12878 ENCSR841NDX.ELF1.GM12878 165 bp overlap

ELF2 1 dataset

Motif DE_36h DE_36h-ELF2_MA1483.3 10 bp overlap

ELF3 1 dataset

Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap

ELF4 1 dataset

Motif DE_36h DE_36h-ELF4_MA0641.1 12 bp overlap

ELK4 1 dataset

Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 290 bp overlap

ERF::FOXO1 1 dataset

Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap

ERF::NHLH1 2 datasets

Motif DE_24h DE_24h-ERFNHLH1_MA1938.2 16 bp overlap

Motif DE_36h DE_36h-ERFNHLH1_MA1938.2 16 bp overlap

ETV1 1 dataset

Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV6 1 dataset

Motif DE_36h DE_36h-ETV6_MA0645.2 9 bp overlap

ETV7 1 dataset

Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap

Elf5 1 dataset

Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap

Erg 1 dataset

Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap

FLI1 3 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 200 bp overlap

ChIP A-673_D11 GSE129155.FLI1.A-673_D11 241 bp overlap

ChIP SEM GSE117864.FLI1.SEM 201 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 363 bp overlap

ChIP DE DE-FOXA2-2 348 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap

GABPA 1 dataset

Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 356 bp overlap

ChIP DE DE-GATA4-2 335 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 325 bp overlap

ChIP DE DE-GATA6-2 331 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 406 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 449 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 405 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 308 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 449 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 436 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 226 bp overlap

IKZF1 3 datasets

ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 162 bp overlap

Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 413 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 449 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 303 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 314 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 406 bp overlap

MAX 1 dataset

ChIP P493-6 GSE36354.MAX.P493-6 171 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 124 bp overlap

NEUROG2 1 dataset

Motif DE_36h DE_36h-NEUROG2_MA1642.2 7 bp overlap

NR1I3 1 dataset

Motif DE_36h DE_36h-NR1I3_MA1534.2 8 bp overlap

ONECUT1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 168 bp overlap

ONECUT2 1 dataset

ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 142 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 276 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 165 bp overlap

POU5F1 1 dataset

ChIP hiPSC GSE56567.POU5F1.hiPSC 176 bp overlap

RBPJ 1 dataset

ChIP NHEK GSE29498.RBPJ.NHEK 171 bp overlap

REST 1 dataset

Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap

RUNX1 1 dataset

ChIP NALM-6 GSE126300.RUNX1.NALM-6 194 bp overlap

SMAD2 3 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 322 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 381 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 296 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 274 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 449 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 449 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 449 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 419 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 449 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 449 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 449 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 449 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 281 bp overlap

SMAD3 4 datasets

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 230 bp overlap

Motif DE_12h DE_12h-SMAD3_MA0795.1 10 bp overlap

Motif DE_36h DE_36h-SMAD3_MA0795.1 10 bp overlap

ChIP endoderm GSE29422.SMAD3.endoderm 331 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 309 bp overlap

SMAD5 2 datasets

Motif DE_12h DE_12h-SMAD5_MA1557.1 10 bp overlap

Motif DE_36h DE_36h-SMAD5_MA1557.1 10 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 280 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 391 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 449 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 182 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 252 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 295 bp overlap

SPI1 1 dataset

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 182 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

Smad4 2 datasets

Motif DE_12h DE_12h-Smad4_MA1153.2 7 bp overlap

Motif DE_36h DE_36h-Smad4_MA1153.2 7 bp overlap

Spi1 1 dataset

Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap

Stat5a 2 datasets

Motif DE_24h DE_24h-Stat5a_MA1624.2 9 bp overlap

Motif DE_36h DE_36h-Stat5a_MA1624.2 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 192 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap

ZBTB11 1 dataset

Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap

ZBTB7A 1 dataset

Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap

ZNF148 3 datasets

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap

Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap

ZNF175 1 dataset

Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap

ZNF281 3 datasets

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap

Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap

ZNF418 3 datasets

Motif DE_24h DE_24h-ZNF418_MA1980.1 15 bp overlap

Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap

Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 358 bp overlap

ZNF768 1 dataset

Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap

ZNF85 1 dataset

Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap