chr19 : 43,739,035 43,739,287
252 bp 58 TFs 0 linked genes
This 252 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:43,734,035 – 43,744,287
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AR 5 datasets
ChIP breast_tumor_Female_8 GSE104399.AR.breast_tumor_Female_8 120 bp overlap
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 252 bp overlap
ChIP breast_tumor_Male_20 GSE104399.AR.breast_tumor_Male_20 108 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 240 bp overlap
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 76 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 252 bp overlap
BCL11A 4 datasets
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 139 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 93 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 157 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 105 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 154 bp overlap
BRD4 1 dataset
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 252 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 77 bp overlap
CDX2 2 datasets
ChIP LS180_125 GSE31939.CDX2.LS180_125 128 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 174 bp overlap
CTCF 3 datasets
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 123 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 52 bp overlap
ChIP transverse colon ENCFF749DPF 79 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 106 bp overlap
ESR1 34 datasets
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 91 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 121 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 161 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 114 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 85 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 140 bp overlap
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 102 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 152 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 115 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 192 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 252 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 76 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 169 bp overlap
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 171 bp overlap
ChIP breast_tumor_Female_8 GSE104399.ESR1.breast_tumor_Female_8 93 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 126 bp overlap
ChIP breast_tumor_Male_16 GSE104399.ESR1.breast_tumor_Male_16 114 bp overlap
ChIP breast_tumor_Male_17 GSE104399.ESR1.breast_tumor_Male_17 86 bp overlap
ChIP breast_tumor_Male_18 GSE104399.ESR1.breast_tumor_Male_18 99 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 148 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 124 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 252 bp overlap
ChIP breast_tumor_Male_25 GSE104399.ESR1.breast_tumor_Male_25 92 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 123 bp overlap
ChIP breast_tumor_Male_4 GSE104399.ESR1.breast_tumor_Male_4 91 bp overlap
ChIP breast_tumor_Male_9 GSE104399.ESR1.breast_tumor_Male_9 74 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_1 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_1 73 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 163 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_4 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_4 97 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 107 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 107 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_J GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_J 68 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 83 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 63 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 252 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 55 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 106 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 119 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 155 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 80 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 226 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 169 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 92 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 60 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 153 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 153 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 156 bp overlap
HNF4A 2 datasets
ChIP IM95 GSE114018.HNF4A.IM95 175 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 252 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 116 bp overlap
JUN 1 dataset
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 60 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 59 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 220 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 199 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 219 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 252 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 128 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 173 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 127 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 217 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_minOHT GSE111905.MYCN.SH-EP_MYCNER_minOHT 114 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 89 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 75 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 84 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 79 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 252 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 52 bp overlap
POLR2A 9 datasets
ChIP sigmoid colon ENCFF725QFT 225 bp overlap
ChIP sigmoid colon ENCFF754JQR 184 bp overlap
ChIP spleen ENCFF446ZGT 174 bp overlap
ChIP stomach ENCFF607ZPU 202 bp overlap
ChIP stomach ENCFF820WZN 167 bp overlap
ChIP transverse colon ENCFF607LKE 230 bp overlap
ChIP transverse colon ENCFF610RWV 252 bp overlap
ChIP transverse colon ENCFF840PXT 207 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 252 bp overlap
RARA 1 dataset
ChIP U-937_ATRA-treated_RAR GSE98006.RARA.U-937_ATRA-treated_RAR 92 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 197 bp overlap
ChIP A549 ENCFF752ATT 252 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 252 bp overlap
SMAD4 1 dataset
ChIP Hep-G2_Ab_R516-1-1G12 GSE97661.SMAD4.Hep-G2_Ab_R516-1-1G12 160 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 132 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 212 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 252 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 250 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 216 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 252 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 50 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 51 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 57 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 165 bp overlap
USF2 1 dataset
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 137 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 162 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 194 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 121 bp overlap