chr18 : 24,983,623 – 24,983,915
292 bp 62 TFs 0 linked genes
This 292 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:24,978,623 – 24,988,915
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 132 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 146 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 163 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 185 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 292 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 235 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 238 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 156 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 292 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 178 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 288 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 168 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 288 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
E2F6 1 dataset
ChIP H1 ENCFF785DWK 292 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 135 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 229 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA1::TAL1 1 dataset
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 292 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 212 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 245 bp overlap
HOXB2::ELK1 1 dataset
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 289 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 265 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 199 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 292 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 95 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 268 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 195 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 214 bp overlap
ChIP H1 ENCFF747ZPQ 238 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 292 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 282 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 254 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 292 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 292 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 292 bp overlap
ChIP hESC GSE18292.NANOG.hESC 117 bp overlap
NIPBL 3 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 194 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 244 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 197 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 12 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 238 bp overlap
ChIP H1 ENCFF698ZAP 194 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 292 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 201 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 292 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 180 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 180 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 201 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 250 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 292 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 236 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 213 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 292 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 261 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 268 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP WA01 ENCSR000BHM.REST.WA01 190 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 227 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 292 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 292 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 292 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 288 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 292 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 237 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 211 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 292 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 272 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 292 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 292 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 284 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 114 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 292 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 241 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 196 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 292 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 254 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 130 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 238 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 249 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 250 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 209 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 83 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 251 bp overlap
ZBTB18 1 dataset
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 221 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 263 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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