chr2 : 660,674 – 660,936

262 bp 53 TFs 0 linked genes

This 262 bp open chromatin element has no linked target genes and is bound by 53 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

53 transcription factors

AR 2 datasets

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 149 bp overlap

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 185 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 262 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 179 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 262 bp overlap

BRD4 4 datasets

ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 71 bp overlap

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 198 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 99 bp overlap

CBFB 1 dataset

ChIP ME-1 GSE46044.CBFB.ME-1 209 bp overlap

CBX2 1 dataset

ChIP K-562 ENCSR000ATU.CBX2.K-562 153 bp overlap

CHD1 1 dataset

ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 193 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 107 bp overlap

E2F6 3 datasets

Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap

ChIP H1 ENCFF785DWK 179 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 262 bp overlap

EP300 1 dataset

ChIP osteoblast ENCSR000AUD.EP300.osteoblast 262 bp overlap

ERG 1 dataset

ChIP MCF-7 GSE23730.ERG.MCF-7 201 bp overlap

ESR1 2 datasets

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 237 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 149 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH1 1 dataset

ChIP ProEs_SHEZH2 GSE59087.EZH1.ProEs_SHEZH2 214 bp overlap

EZH2 4 datasets

ChIP ProEs GSE59087.EZH2.ProEs 261 bp overlap

ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 257 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 262 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 200 bp overlap

FLI1 1 dataset

ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 195 bp overlap

GABPA 2 datasets

ChIP H1 ENCFF739QFD 262 bp overlap

ChIP WA01 ENCSR000BIW.GABPA.WA01 154 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap

HIF3A 1 dataset

ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 171 bp overlap

KDM5B 1 dataset

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 117 bp overlap

KLF5 1 dataset

ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 153 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 87 bp overlap

KMT2A 1 dataset

ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 235 bp overlap

MAF1 1 dataset

ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 133 bp overlap

MAX 3 datasets

ChIP H1 ENCFF914VQY 262 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap

ChIP WTC11 ENCFF223QFY 262 bp overlap

MCM2 1 dataset

ChIP K562 ENCFF897SNA 261 bp overlap

NCAPH2 1 dataset

ChIP HEK293 GSE97540.NCAPH2.HEK293 262 bp overlap

NFXL1 1 dataset

ChIP K-562 ENCSR085DDI.NFXL1.K-562 88 bp overlap

OGG1 4 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 262 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 262 bp overlap

ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 202 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 262 bp overlap

OSR2 1 dataset

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 229 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 85 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 133 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 118 bp overlap

RXR 1 dataset

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 220 bp overlap

SETDB1 1 dataset

ChIP K-562 ENCSR000EWI.SETDB1.K-562 139 bp overlap

SMARCA4 2 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 207 bp overlap

ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 262 bp overlap

SREBP2 1 dataset

ChIP HCC70 GSE126380.SREBP2.HCC70 232 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 217 bp overlap

SUZ12 1 dataset

ChIP K-562 ENCSR000AUC.SUZ12.K-562 215 bp overlap

TBP 2 datasets

ChIP WA01 ENCSR000ECB.TBP.WA01 160 bp overlap

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 262 bp overlap

TFDP1 1 dataset

Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap

TP63 1 dataset

ChIP breast-organoid GSE113909.TP63.breast-organoid 165 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 208 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 262 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 71 bp overlap

ZNF263 4 datasets

ChIP HEK293 ENCFF336CWQ 229 bp overlap

ChIP HEK293T GSE78099.ZNF263.HEK293T 219 bp overlap

ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 262 bp overlap

ChIP K-562 ENCSR000EWN.ZNF263.K-562 262 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 225 bp overlap

ZSCAN31 1 dataset

Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Zfx 1 dataset

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap