chr16 : 30,841,062 – 30,841,882
820 bp 49 TFs 23 linked genes
This 820 bp open chromatin element is linked to 23 target genes and is bound by 49 transcription factors.
Linked Genes
23 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MIR762HG 33.9 kb Distal Multiome+HiCAR
BCL7C 52.6 kb Distal Multiome+HiCAR
ZNF629 54.4 kb Distal Multiome+HiCAR
RNF40 79.2 kb Distal Multiome
FBXL19 82.0 kb Distal Multiome
PHKG2 93.2 kb Distal Multiome
TMEM265 100.9 kb Distal Multiome
ORAI3 107.5 kb Distal Multiome
SETD1A 116.2 kb Distal Multiome
SRCAP 143.4 kb Distal Multiome
FBRS 183.1 kb Distal Multiome
PRR14 190.9 kb Distal Multiome
STX4 192.0 kb Distal Multiome
ZNF689 231.2 kb Distal Multiome
ZNF668 232.1 kb Distal Multiome
ZNF646 232.9 kb Distal Multiome
VKORC1 253.2 kb Distal Multiome
ENSG00000260167 255.7 kb Distal Multiome
ZNF785 255.8 kb Distal Multiome
BCKDK 266.8 kb Distal Multiome
KAT8 276.1 kb Distal Multiome
ZNF764 283.2 kb Distal Multiome
PRSS8 294.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:30,836,062 – 30,846,882
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 327 bp overlap
CDX2 1 dataset
Motif DE_72h DE_72h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_72h DE_72h-CDX4_MA1473.2 9 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 466 bp overlap
ChIP BLaER1 ENCFF274GAT 174 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ChIP BLaER1 ENCFF460KDD 261 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 249 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 463 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 163 bp overlap
ESR1 1 dataset
ChIP T-47D GSE148277.ESR1.T-47D 242 bp overlap
FOXA1 1 dataset
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 133 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 697 bp overlap
ChIP DE DE-FOXA2-2 735 bp overlap
FOXD3 1 dataset
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF178GBS 461 bp overlap
ChIP MCF-7 ENCFF352QVM 481 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 197 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 577 bp overlap
ChIP DE DE-GATA4-2 679 bp overlap
ChIP foregut GSE117136.GATA4.foregut 499 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 579 bp overlap
ChIP DE DE-GATA6-2 637 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 576 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 353 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
HOXB13 1 dataset
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_72h DE_72h-Hoxd13_MA0909.4 7 bp overlap
RBPJ 1 dataset
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 197 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 541 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 487 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 540 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 195 bp overlap
SOX12 1 dataset
Motif DE_72h DE_72h-SOX12_MA1561.2 10 bp overlap
SOX14 1 dataset
Motif DE_72h DE_72h-SOX14_MA1562.2 9 bp overlap
SOX15 1 dataset
Motif DE_72h DE_72h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 462 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 519 bp overlap
SOX18 1 dataset
Motif DE_72h DE_72h-SOX18_MA1563.2 8 bp overlap
SOX8 1 dataset
Motif DE_72h DE_72h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_72h DE_72h-SOX9_MA0077.2 8 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_72h DE_72h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 1 dataset
Motif DE_72h DE_72h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 256 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 278 bp overlap
Thap11 1 dataset
Motif DE_72h DE_72h-Thap11_MA1573.2 14 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 465 bp overlap
ZMYM3 1 dataset
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 141 bp overlap
ZNF16 1 dataset
Motif DE_72h DE_72h-ZNF16_MA1654.2 21 bp overlap
ZNF354A 1 dataset
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF454 1 dataset
Motif DE_72h DE_72h-ZNF454_MA1712.2 17 bp overlap
ZNF514 1 dataset
ChIP HEK293 ENCFF094JCG 331 bp overlap
ZNF544 2 datasets
ChIP HEK293 ENCFF605PGR 299 bp overlap
ChIP HEK293 ENCSR167XFW.ZNF544.HEK293 433 bp overlap
ZNF558 1 dataset
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF85 1 dataset
Motif DE_72h DE_72h-ZNF85_MA1720.2 12 bp overlap
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