chr15 : 69,552,979 69,553,564
585 bp 56 TFs 4 linked genes
This 585 bp open chromatin element is linked to 4 target genes and is bound by 56 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
DRAIC 4.5 kb Proximal Proximity
RPLP1 100.4 kb Distal Multiome
KIF23 138.9 kb Distal Multiome
PAQR5 254.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:69,547,979 – 69,558,564
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 12 datasets
ChIP VCaP GSE83650.AR.VCaP 180 bp overlap
ChIP VCaP GSE98809.AR.VCaP 180 bp overlap
ChIP VCaP GSE32892.AR.VCaP 189 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 201 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 220 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 202 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 171 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 195 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 204 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 248 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 208 bp overlap
ChIP prostate_P5_T GSE130408.AR.prostate_P5_T 171 bp overlap
Ahr::Arnt 2 datasets
Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_72h DE_72h-AhrArnt_MA0006.2 5 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 215 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 211 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 256 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 81 bp overlap
DPRX 2 datasets
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 1 dataset
Motif DE_36h DE_36h-Dmrt1_MA1603.2 9 bp overlap
E2F6 2 datasets
Motif DE_48h DE_48h-E2F6_MA0471.3 8 bp overlap
Motif DE_72h DE_72h-E2F6_MA0471.3 8 bp overlap
EOMES 4 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_72h DE_72h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 265 bp overlap
ERG 3 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 139 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 299 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 297 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_72h DE_72h-EWSR1-FLI1_MA0149.1 18 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 214 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 384 bp overlap
GATA2 3 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 286 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 251 bp overlap
GATA4 9 datasets
ChIP A-549 GSE85002.GATA4.A-549 163 bp overlap
ChIP DE DE-GATA4-1 543 bp overlap
ChIP DE DE-GATA4-2 516 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 356 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 386 bp overlap
GATA5 1 dataset
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 289 bp overlap
ChIP DE DE-GATA6-1 474 bp overlap
ChIP DE DE-GATA6-2 560 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 585 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 559 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 528 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 494 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 585 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 585 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 126 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 576 bp overlap
ChIP foregut GSE117136.GATA6.foregut 341 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 254 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 394 bp overlap
Gata3 1 dataset
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
HOXB13 5 datasets
Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 98 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 171 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 213 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 248 bp overlap
ISL2 3 datasets
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
MAFK 2 datasets
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
Motif DE_72h DE_72h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 4 datasets
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_72h DE_72h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_72h DE_72h-MGAEVX1_MA1960.2 11 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 284 bp overlap
Mafg 2 datasets
Motif DE_48h DE_48h-Mafg_MA0659.4 12 bp overlap
Motif DE_72h DE_72h-Mafg_MA0659.4 12 bp overlap
Mecom 1 dataset
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
NFYB 2 datasets
Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
PAX6 3 datasets
Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap
Motif DE_48h DE_48h-PAX6_MA0069.1 14 bp overlap
Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
PRDM9 2 datasets
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 387 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 427 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 366 bp overlap
SOX10 1 dataset
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SP5 2 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Sox11 1 dataset
Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap
TBP 1 dataset
Motif DE_36h DE_36h-TBP_MA0108.3 7 bp overlap
TBR1 3 datasets
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap
TBX1 3 datasets
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX20 3 datasets
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_72h DE_72h-TBX20_MA0689.1 11 bp overlap
TRPS1 1 dataset
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Wt1 2 datasets
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZFP14 2 datasets
Motif DE_48h DE_48h-ZFP14_MA1972.1 15 bp overlap
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZKSCAN5 2 datasets
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF213 1 dataset
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 123 bp overlap
ZNF263 1 dataset
ChIP HEK293 GSE76494.ZNF263.HEK293 125 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 96 bp overlap
ZNF331 2 datasets
Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
ZNF667 2 datasets
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF675 2 datasets
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
Motif DE_72h DE_72h-ZNF675_MA1714.2 19 bp overlap
ZNF701 1 dataset
Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap
ZNF75A 3 datasets
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_72h DE_72h-ZNF75A_MA2097.1 12 bp overlap