chr15 : 60,858,558 60,859,431
873 bp 55 TFs 1 linked gene
This 873 bp open chromatin element is linked to RORA and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RORA 370.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:60,853,558 – 60,864,431
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 240 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 206 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 251 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 240 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 179 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 341 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 187 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 364 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 206 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 272 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 89 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 393 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 165 bp overlap
ChIP GM12878 ENCFF167CZS 321 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 245 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF039QRE 333 bp overlap
ETV6 3 datasets
ChIP GM12878 ENCFF105ZMI 355 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 288 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 183 bp overlap
EZH2 3 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 214 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 95 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 304 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 834 bp overlap
ChIP DE DE-FOXA2-2 873 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 418 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 202 bp overlap
GABPA 1 dataset
ChIP GM12878 ENCFF872TWR 346 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 698 bp overlap
ChIP DE DE-GATA4-2 831 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 781 bp overlap
ChIP DE DE-GATA6-2 814 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 320 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 315 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 295 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 355 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 319 bp overlap
ChIP GM12878 ENCFF824TGK 641 bp overlap
ChIP GM12878 ENCFF824TGK 246 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 209 bp overlap
ChIP GM12878 ENCFF918AID 407 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 270 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 328 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 356 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 302 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 417 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 702 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 338 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 263 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 231 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 324 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 298 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 340 bp overlap
NANOG 4 datasets
ChIP WA01 ERP004238.NANOG.WA01 185 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 621 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 265 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 255 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 400 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 263 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 568 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 119 bp overlap
RELA 3 datasets
ChIP GM12878 ENCSR000EAG.RELA.GM12878 231 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 156 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 160 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 498 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 401 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 209 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 212 bp overlap
SMAD2 5 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 293 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 257 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 199 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 751 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 476 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 873 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 873 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 873 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 873 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 855 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 873 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 814 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 714 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 264 bp overlap
SMAD3 4 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 215 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 300 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 214 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 247 bp overlap
SMAD4 3 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 306 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 298 bp overlap
ChIP hESC GSE29422.SMAD4.hESC 173 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 322 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 412 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 716 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 823 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 425 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 281 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 267 bp overlap
TCF12 4 datasets
ChIP GM12878 ENCFF433DMU 292 bp overlap
ChIP GM12878 ENCFF506WWB 195 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 123 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 248 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 110 bp overlap
TCF7 1 dataset
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 141 bp overlap
TRIM22 3 datasets
ChIP GM12878 ENCFF919OMX 378 bp overlap
ChIP GM12878 ENCFF919OMX 445 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 287 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 194 bp overlap
ZNF597 1 dataset
ChIP GM12878 GSE97661.ZNF597.GM12878 212 bp overlap