chr13 : 110,548,651 – 110,549,199
548 bp 51 TFs 0 linked genes
This 548 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:110,543,651 – 110,554,199
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP GSE43720.AR.LNCaP 183 bp overlap
ChIP LNCaP_D226N_shFOXA1_Ethanol GSE128883.AR.LNCaP_D226N_shFOXA1_Ethanol 165 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 77 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 151 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 76 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 345 bp overlap
BRD4 4 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 186 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 228 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 507 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 185 bp overlap
CTCF 1 dataset
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 378 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 222 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 163 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 200 bp overlap
ERG 4 datasets
ChIP VCaP GSE49091.ERG.VCaP 251 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 247 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 326 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 319 bp overlap
ESR1 30 datasets
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 52 bp overlap
ChIP MCF-7_E2+4OHT GSE119702.ESR1.MCF-7_E2+4OHT 113 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 200 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 119 bp overlap
ChIP MCF-7_OHT GSE119702.ESR1.MCF-7_OHT 113 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 200 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 223 bp overlap
ChIP T-47D GSE72249.ESR1.T-47D 143 bp overlap
ChIP T-47D GSE68355.ESR1.T-47D 90 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 87 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 63 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 357 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 354 bp overlap
ChIP T-47D_E2 GSE72249.ESR1.T-47D_E2 76 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 184 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 514 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 390 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 113 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 268 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 122 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 80 bp overlap
ChIP breast-cancer_S440-2187 GSE128018.ESR1.breast-cancer_S440-2187 127 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 246 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 251 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 145 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 420 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 59 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 374 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 185 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 216 bp overlap
ESR1_Y537S 1 dataset
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 96 bp overlap
ESRRA 4 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 226 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 400 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 360 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 505 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 340 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 207 bp overlap
FOXA1 44 datasets
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 165 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 136 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 122 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 104 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 96 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 124 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 104 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 108 bp overlap
ChIP T-47D GSE72249.FOXA1.T-47D 188 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 166 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 189 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 242 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 133 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 192 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 252 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 157 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 193 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 207 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 171 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 233 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 163 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 130 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 99 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 341 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 180 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 271 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 233 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 224 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 185 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 222 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 138 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 80 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 83 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 266 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 441 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 438 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 137 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 548 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 316 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 233 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 184 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 278 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 127 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 174 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 528 bp overlap
ChIP DE DE-FOXA2-2 546 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 273 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 93 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 148 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 172 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 178 bp overlap
GATA3 3 datasets
ChIP T-47D GSE51274.GATA3.T-47D 211 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 162 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 511 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 154 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 51 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 438 bp overlap
ChIP DE DE-GATA4-2 540 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 424 bp overlap
ChIP DE DE-GATA6-2 508 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 299 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 324 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 231 bp overlap
HSF1 1 dataset
ChIP SK-BR-3 GSE38901.HSF1.SK-BR-3 167 bp overlap
JUND 1 dataset
ChIP T47D ENCFF318BWX 282 bp overlap
MED1 1 dataset
ChIP VCaP_Veh GSE125245.MED1.VCaP_Veh 204 bp overlap
NR3C1 2 datasets
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 64 bp overlap
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 523 bp overlap
OSR2 1 dataset
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PGR 8 datasets
ChIP T-47D GSE31129.PGR.T-47D 237 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 485 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 427 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 311 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 195 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 62 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 147 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 220 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 509 bp overlap
POU4F2 1 dataset
Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 204 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 548 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 475 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 511 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 185 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 425 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 542 bp overlap
STAT3 4 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 161 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 206 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 234 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 222 bp overlap
TEAD4 4 datasets
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 81 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 80 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 188 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 180 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 134 bp overlap
TFAP2A 1 dataset
ChIP MCF-7 GSE60270.TFAP2A.MCF-7 132 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 128 bp overlap
TLE3 1 dataset
ChIP MCF-7 GSE41561.TLE3.MCF-7 210 bp overlap
YY1AP1 3 datasets
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 92 bp overlap
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 136 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 225 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 367 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 222 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Zfp961 1 dataset
Motif DE_60h DE_60h-Zfp961_MA2126.1 8 bp overlap
Zic1::Zic2 1 dataset
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
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