chr13 : 100,738,255 – 100,738,733

478 bp 74 TFs 0 linked genes

This 478 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

BARX1 1 dataset

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BRD4 7 datasets

ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 238 bp overlap

ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 125 bp overlap

ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 153 bp overlap

ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 164 bp overlap

ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 250 bp overlap

ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 204 bp overlap

ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 186 bp overlap

BSX 1 dataset

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CDK8 1 dataset

ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 264 bp overlap

CEBPA 11 datasets

ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 116 bp overlap

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 120 bp overlap

ChIP MV4-11 GSE88746.CEBPA.MV4-11 406 bp overlap

ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 133 bp overlap

ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 174 bp overlap

ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 233 bp overlap

ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 236 bp overlap

ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 216 bp overlap

ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 223 bp overlap

ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 208 bp overlap

ChIP U-937 ERP008568.CEBPA.U-937 137 bp overlap

CEBPB 4 datasets

ChIP MV4-11 GSE88746.CEBPB.MV4-11 441 bp overlap

ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 197 bp overlap

ChIP THP-1_eGFP-Pam3csk-0h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-0h 184 bp overlap

ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 229 bp overlap

CTCF 6 datasets

ChIP GM23338 ENCFF772DML 187 bp overlap

ChIP GM23338 ENCFF772DML 201 bp overlap

ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 136 bp overlap

ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 130 bp overlap

ChIP K-562_8005 GSE131349.CTCF.K-562_8005 81 bp overlap

ChIP U-937 ERP008568.CTCF.U-937 267 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 248 bp overlap

ChIP BLaER1 ENCFF460KDD 203 bp overlap

DLX1 1 dataset

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

EBF3 1 dataset

Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap

EP300 1 dataset

ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 87 bp overlap

ERF::FOXI1 1 dataset

Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap

ESRRA 1 dataset

Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap

Ebf2 1 dataset

Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap

FLI1 6 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 320 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 339 bp overlap

ChIP A-673_D11 GSE129155.FLI1.A-673_D11 187 bp overlap

ChIP A-673_D14 GSE129155.FLI1.A-673_D14 411 bp overlap

ChIP A-673_D17 GSE129155.FLI1.A-673_D17 238 bp overlap

ChIP NB4 GSE23730.FLI1.NB4 190 bp overlap

FLI1::FOXI1 1 dataset

Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXJ2::ELF1 1 dataset

Motif ES_0h ES_0h-FOXJ2ELF1_MA1952.2 11 bp overlap

GBX2 1 dataset

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

HDAC1 1 dataset

ChIP NB4 GSE126720.HDAC1.NB4 163 bp overlap

HESX1 1 dataset

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

IKZF1 1 dataset

Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap

JMJD1C 1 dataset

ChIP NB4 GSE63484.JMJD1C.NB4 271 bp overlap

JUN 5 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 299 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 313 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 388 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 318 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 346 bp overlap

KDM1A 1 dataset

ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 294 bp overlap

KMT2B 1 dataset

ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 276 bp overlap

LBX2 1 dataset

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LDB1 1 dataset

ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 187 bp overlap

LHX2 1 dataset

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

MED1 1 dataset

ChIP MOLM-14_Veh GSE124963.MED1.MOLM-14_Veh 143 bp overlap

MSX1 1 dataset

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

MYB 2 datasets

ChIP THP-1 GSE90769.MYB.THP-1 190 bp overlap

ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 297 bp overlap

Mecom 1 dataset

Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap

Msx3 1 dataset

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NANOG 7 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 351 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 225 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 182 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 478 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 431 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 378 bp overlap

ChIP hESC GSE18292.NANOG.hESC 163 bp overlap

Nfat5 1 dataset

Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap

Nobox 1 dataset

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 258 bp overlap

PPARA::RXRA 1 dataset

Motif ES_0h ES_0h-PPARARXRA_MA1148.2 17 bp overlap

RAD21 2 datasets

ChIP K-562 ENCSR000BKV.RAD21.K-562 87 bp overlap

ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 147 bp overlap

RAX 1 dataset

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

REST 1 dataset

Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap

RNF2 1 dataset

ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 195 bp overlap

RUNX1 3 datasets

ChIP MV4-11 GSE79899.RUNX1.MV4-11 299 bp overlap

ChIP NB4 GSE81992.RUNX1.NB4 369 bp overlap

ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 121 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 180 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 431 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 259 bp overlap

SMC3 1 dataset

ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 186 bp overlap

SPIB 1 dataset

Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap

SS18-SSX 1 dataset

ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 252 bp overlap

Spi1 1 dataset

Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 236 bp overlap

TCF12 1 dataset

ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 145 bp overlap

TCF3 1 dataset

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 131 bp overlap

TFAP2A 1 dataset

Motif ES_0h ES_0h-TFAP2A_MA0872.1 13 bp overlap

TFAP2B 1 dataset

Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap

TFAP2C 2 datasets

Motif ES_0h ES_0h-TFAP2C_MA0815.1 13 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 166 bp overlap

TRIM24 2 datasets

ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 395 bp overlap

ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 348 bp overlap

VDR 1 dataset

ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 309 bp overlap

ZNF184 1 dataset

Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap

ZNF331 1 dataset

Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 222 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 164 bp overlap

ZNF558 1 dataset

Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap

ZNF766 1 dataset

Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap

Zfp961 1 dataset

Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap

Zic1::Zic2 1 dataset

Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap