chr13 : 99,417,355 99,417,772
417 bp 48 TFs 0 linked genes
This 417 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:99,412,355 – 99,422,772
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 404 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 172 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 185 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 417 bp overlap
BRD4 8 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 154 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 330 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 216 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 238 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 405 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 69 bp overlap
ChIP hESC GSE33281.BRD4.hESC 86 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 417 bp overlap
CDKN1B 1 dataset
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 170 bp overlap
CREB1 2 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 50 bp overlap
ChIP HepG2 ENCFF792THT 82 bp overlap
CTCF 17 datasets
ChIP DND41 ENCSR000AQU.CTCF.DND41 170 bp overlap
ChIP GM23338 ENCFF531QOI 375 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H9 ENCFF152GTF 395 bp overlap
ChIP H9 ENCFF152GTF 284 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 195 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 170 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 209 bp overlap
ChIP endodermal cell ENCFF471YCZ 411 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 321 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 304 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 304 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 417 bp overlap
ChIP neural cell ENCFF335ADI 417 bp overlap
ChIP neural cell ENCFF335ADI 218 bp overlap
ChIP neural progenitor cell ENCFF420RBO 354 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 254 bp overlap
CTCFL 2 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 115 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 190 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 324 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 417 bp overlap
ChIP neural cell ENCFF442QNK 186 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 238 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 342 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 244 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 113 bp overlap
IKZF1 2 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 147 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 130 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 222 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 234 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 396 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 401 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 85 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 266 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 201 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 347 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 263 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 184 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 260 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 414 bp overlap
RAD21 2 datasets
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 59 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 170 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 54 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 58 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 290 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 183 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 161 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 166 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 417 bp overlap
ChIP H1 ENCFF042ZSL 260 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 280 bp overlap
SMARCA4 4 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 417 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 55 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 307 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 225 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 377 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 221 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 174 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 115 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 327 bp overlap
TAL1 2 datasets
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 140 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 136 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 144 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 122 bp overlap