chr1 : 215,651,923 215,652,661
738 bp 72 TFs 0 linked genes
This 738 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:215,646,923 – 215,657,661
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ATF2 2 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 465 bp overlap
CREB1 2 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
CREM 2 datasets
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
Motif ES_0h ES_0h-CREM_MA0609.3 10 bp overlap
CTCF 1 dataset
ChIP uterus ENCSR527TPP.CTCF.uterus 189 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 254 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 404 bp overlap
ESR1 2 datasets
Motif DE_12h DE_12h-ESR1_MA0112.4 15 bp overlap
Motif ES_0h ES_0h-ESR1_MA0112.4 15 bp overlap
JUN 7 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 299 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 295 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 204 bp overlap
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 738 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif ES_0h ES_0h-JUND_MA0492.2 11 bp overlap
KDM1A 2 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 235 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 169 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 308 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MEF2C 2 datasets
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
Motif ES_0h ES_0h-MEF2C_MA0497.2 11 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
Motif ES_0h ES_0h-MEIS1_MA1639.2 9 bp overlap
MYB 2 datasets
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 309 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 267 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 738 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 738 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 408 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 435 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 284 bp overlap
ChIP hESC GSE20650.NANOG.hESC 224 bp overlap
ChIP hESC GSE18292.NANOG.hESC 226 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 152 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NR1D1 2 datasets
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
NR1D2 2 datasets
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Motif ES_0h ES_0h-NR1D2_MA1532.2 15 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX1 2 datasets
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
Motif ES_0h ES_0h-PBX1_MA0070.2 9 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF385PDC 206 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 274 bp overlap
POU5F1 11 datasets
ChIP GM23338 ENCFF333SNB 274 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 738 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 254 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 392 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 303 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 293 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 196 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 504 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 241 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
RORB 2 datasets
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
Motif ES_0h ES_0h-RORB_MA1150.2 10 bp overlap
RORC 2 datasets
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
Motif ES_0h ES_0h-RORC_MA1151.2 10 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMARCA4 3 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 282 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 379 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 176 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 357 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 434 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 111 bp overlap
SMARCC1 3 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 195 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 473 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 166 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 184 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 315 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT3 1 dataset
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Stat5a 1 dataset
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 169 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 168 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 317 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF136 2 datasets
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 221 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF454 2 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 144 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 137 bp overlap