Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 112 bp overlap

ASCL1 1 dataset

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 120 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 365 bp overlap

ATRX 2 datasets

ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 99 bp overlap

ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 148 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 365 bp overlap

BRD4 7 datasets

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 365 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 92 bp overlap

ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 324 bp overlap

ChIP OVCAR-3_JQ1 GSE77568.BRD4.OVCAR-3_JQ1 218 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 365 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 365 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 236 bp overlap

CBX7 1 dataset

ChIP hESC GSE133412.CBX7.hESC 152 bp overlap

CHD2 1 dataset

ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 258 bp overlap

CTCF 4 datasets

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 119 bp overlap

ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 154 bp overlap

ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 126 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 167 bp overlap

EP300 3 datasets

ChIP SK-N-SH ENCFF829RWA 275 bp overlap

ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 210 bp overlap

ChIP neural ENCSR843ZUP.EP300.neural 354 bp overlap

EZH2 3 datasets

ChIP LNCaP GSE39459.EZH2.LNCaP 88 bp overlap

ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 93 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 173 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 203 bp overlap

GATA1 1 dataset

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 60 bp overlap

GATA2 4 datasets

ChIP SH-SY5Y ENCFF485YIB 320 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 365 bp overlap

ChIP SK-N-SH ENCFF764OZD 276 bp overlap

ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 235 bp overlap

GATA3 4 datasets

ChIP BE2C GSE65664.GATA3.BE2C 196 bp overlap

ChIP Kelly GSE94822.GATA3.Kelly 176 bp overlap

ChIP SH-SY5Y ENCFF475HYF 342 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 146 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-2 283 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 365 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 154 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 150 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 305 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 291 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 329 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 157 bp overlap

HNRNPH1 1 dataset

ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 136 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 302 bp overlap

KDM1A 1 dataset

ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 174 bp overlap

KDM4A 1 dataset

ChIP H1 ENCFF078LED 57 bp overlap

MXI1 2 datasets

ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 188 bp overlap

ChIP neural ENCSR934NHU.MXI1.neural 89 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 365 bp overlap

MYC 2 datasets

ChIP NB69 GSE138295.MYC.NB69 85 bp overlap

ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 176 bp overlap

MYCN 2 datasets

ChIP NB-1643 GSE138295.MYCN.NB-1643 209 bp overlap

ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 131 bp overlap

MYOD1 1 dataset

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 132 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 165 bp overlap

NEUROD1 2 datasets

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 287 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 78 bp overlap

PDX1 3 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 209 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 162 bp overlap

ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 192 bp overlap

PHOX2B 1 dataset

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 169 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 365 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 274 bp overlap

RAD21 2 datasets

ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 147 bp overlap

ChIP neural ENCSR198ZYJ.RAD21.neural 205 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 223 bp overlap

RCOR1 2 datasets

ChIP SK-N-SH ENCFF518EXB 92 bp overlap

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 242 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 365 bp overlap

SMAD3 1 dataset

ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 202 bp overlap

SMARCA4 3 datasets

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 198 bp overlap

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 225 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 365 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 190 bp overlap

SOX21 1 dataset

ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 208 bp overlap

SUZ12 2 datasets

ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 222 bp overlap

ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 252 bp overlap

TEAD4 2 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 188 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 188 bp overlap

TWIST1 2 datasets

ChIP BE2C GSE80151.TWIST1.BE2C 208 bp overlap

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 208 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 166 bp overlap

ZBTB44 1 dataset

ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 112 bp overlap

Genome Browser