Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

53 transcription factors

AR 1 dataset

ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 137 bp overlap

ASH2L 2 datasets

ChIP WA01 ENCSR850KIP.ASH2L.WA01 338 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 480 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 339 bp overlap

BRD3 1 dataset

ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 176 bp overlap

BRD4 3 datasets

ChIP SW480 GSE110473.BRD4.SW480 473 bp overlap

ChIP SW480 GSE73319.BRD4.SW480 265 bp overlap

ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 406 bp overlap

Bach1::Mafk 1 dataset

Motif DE_72h DE_72h-Bach1Mafk_MA0591.2 12 bp overlap

CHD4 1 dataset

ChIP RH5 GSE155861.CHD4.RH5 328 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 170 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 151 bp overlap

ChIP WA01 ENCSR000BSN.CREB1.WA01 149 bp overlap

CTBP2 2 datasets

ChIP WA01 ENCSR000EUO.CTBP2.WA01 255 bp overlap

ChIP WA01 ENCSR000EUO.CTBP2.WA01 224 bp overlap

CTCF 1 dataset

ChIP endodermal cell ENCFF471YCZ 461 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 185 bp overlap

ESR1 1 dataset

ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 124 bp overlap

EZH2 2 datasets

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 392 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 231 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 690 bp overlap

ChIP DE DE-FOXA2-2 668 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 706 bp overlap

ChIP DE DE-GATA4-2 908 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 653 bp overlap

ChIP DE DE-GATA6-2 691 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 554 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 325 bp overlap

Gfi1B 2 datasets

Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap

Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap

JUN 1 dataset

ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 235 bp overlap

KDM4A 1 dataset

ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 141 bp overlap

KMT2B-D 1 dataset

ChIP SW480 GSE115985.KMT2B-D.SW480 317 bp overlap

MAFF 1 dataset

Motif DE_72h DE_72h-MAFF_MA0495.4 11 bp overlap

MYOD1 1 dataset

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 338 bp overlap

Mafb 1 dataset

Motif DE_72h DE_72h-Mafb_MA0117.3 11 bp overlap

Mafg 1 dataset

Motif DE_72h DE_72h-Mafg_MA0659.4 12 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 242 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 662 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 418 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 444 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 384 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 264 bp overlap

ChIP hESC GSE20650.NANOG.hESC 152 bp overlap

ChIP hESC GSE18292.NANOG.hESC 198 bp overlap

NRL 1 dataset

Motif DE_72h DE_72h-NRL_MA0842.3 12 bp overlap

Nanog 1 dataset

Motif DE_72h DE_72h-Nanog_MA2339.1 7 bp overlap

PHF19 1 dataset

ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 223 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 546 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 179 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 217 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 179 bp overlap

RELA 1 dataset

ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 235 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 132 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 170 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 144 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 148 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 807 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 480 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 527 bp overlap

SMAD3 1 dataset

ChIP hESC GSE29422.SMAD3.hESC 316 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 163 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 313 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 250 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 201 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 202 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 583 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 264 bp overlap

SP1 1 dataset

ChIP WTC11 ENCFF688PEU 428 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 172 bp overlap

TP53 2 datasets

ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 374 bp overlap

ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 266 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 135 bp overlap

ZNF16 1 dataset

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

ZNF331 1 dataset

Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 371 bp overlap

Genome Browser