chr11 : 96,035,162 – 96,035,591

429 bp 68 TFs 0 linked genes

This 429 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

68 transcription factors

ATF2 1 dataset

ChIP macrophage GSE80727.ATF2.macrophage 158 bp overlap

BRD4 1 dataset

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 152 bp overlap

CEBPB 4 datasets

ChIP monocyte GSE98367.CEBPB.monocyte 129 bp overlap

ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 90 bp overlap

ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 102 bp overlap

ChIP monocyte_MACROPHAGE GSE31621.CEBPB.monocyte_MACROPHAGE 107 bp overlap

CHD4 1 dataset

ChIP 501-mel GSE134848.CHD4.501-mel 423 bp overlap

DPF2 1 dataset

ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 188 bp overlap

EGR1 1 dataset

ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 137 bp overlap

EP300 1 dataset

ChIP tibial nerve ENCFF346AYA 112 bp overlap

ERG 1 dataset

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 68 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXL2 3 datasets

ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 237 bp overlap

ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 223 bp overlap

ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 149 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXO1::ELK3 1 dataset

Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 429 bp overlap

ChIP DE DE-GATA4-2 429 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 337 bp overlap

ChIP DE DE-GATA6-2 358 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 429 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 429 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 429 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 429 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 393 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 153 bp overlap

KDM5B 1 dataset

ChIP HCC2157 GSE46055.KDM5B.HCC2157 62 bp overlap

MED1 1 dataset

ChIP SGBS GSE64233.MED1.SGBS 120 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap

MGA 1 dataset

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

MITF 1 dataset

ChIP 501-mel GSE61965.MITF.501-mel 79 bp overlap

NFATC3 1 dataset

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 152 bp overlap

Nfatc1 1 dataset

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

Nr2e1 1 dataset

Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap

ONECUT1 1 dataset

Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap

PBX1 1 dataset

Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap

PHOX2B 1 dataset

Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

RAD21 1 dataset

ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 324 bp overlap

RBM22 1 dataset

ChIP K-562 ENCSR848AOP.RBM22.K-562 160 bp overlap

RELA 4 datasets

ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 60 bp overlap

ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 60 bp overlap

ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 109 bp overlap

ChIP SGBS GSE64233.RELA.SGBS 152 bp overlap

RXR 1 dataset

ChIP macrophage ERP008801.RXR.macrophage 141 bp overlap

SMAD2 3 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 429 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 244 bp overlap

SMAD2-3 4 datasets

ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 155 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 429 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 429 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 429 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 429 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 429 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 429 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 429 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 428 bp overlap

SMAD4 3 datasets

ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 157 bp overlap

ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 156 bp overlap

ChIP endoderm GSE29422.SMAD4.endoderm 195 bp overlap

SMARCA4 3 datasets

ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 429 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 118 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 285 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 245 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 379 bp overlap

SMC1A 1 dataset

ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 104 bp overlap

SOX21 1 dataset

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap

SREBP2 2 datasets

ChIP monocyte GSE129202.SREBP2.monocyte 179 bp overlap

ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 199 bp overlap

STAT3 1 dataset

ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 121 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

Stat6 1 dataset

Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap

TBX1 1 dataset

Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX4 1 dataset

Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

TEAD1 1 dataset

ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 210 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 1 dataset

Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF136 1 dataset

Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap

ZNF143 1 dataset

ChIP K-562 GSE39263.ZNF143.K-562 176 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF454 1 dataset

Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap

ZNF528 1 dataset

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap