chr1 : 200,732,536 200,732,761
225 bp 73 TFs 1 linked gene
This 225 bp open chromatin element is linked to CAMSAP2 and is bound by 73 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CAMSAP2 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:200,727,536 – 200,737,761
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 132 bp overlap
AR 47 datasets
ChIP LNCaP GSE43720.AR.LNCaP 152 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 195 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 225 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 211 bp overlap
ChIP LNCaP GSE80256.AR.LNCaP 193 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 133 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 210 bp overlap
ChIP LNCaP GSE63202.AR.LNCaP 165 bp overlap
ChIP LNCaP GSE121021.AR.LNCaP 185 bp overlap
ChIP LNCaP-C4-2B_R1881_SHCTR GSE61268.AR.LNCaP-C4-2B_R1881_SHCTR 128 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 223 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 225 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 225 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 203 bp overlap
ChIP LNCaP_D226N_shFOXA1_Ethanol GSE128883.AR.LNCaP_D226N_shFOXA1_Ethanol 195 bp overlap
ChIP LNCaP_DHT GSE114266.AR.LNCaP_DHT 190 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 191 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 149 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 182 bp overlap
ChIP LNCaP_DHT_Bag-1L-CMut GSE89938.AR.LNCaP_DHT_Bag-1L-CMut 153 bp overlap
ChIP LNCaP_DHT_GSK4H GSE114266.AR.LNCaP_DHT_GSK4H 159 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.AR.LNCaP_DHT_TNFA 159 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 198 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 191 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 225 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 170 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 159 bp overlap
ChIP LNCaP_L388M_shFOXA1_Ethanol GSE128883.AR.LNCaP_L388M_shFOXA1_Ethanol 198 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 148 bp overlap
ChIP LNCaP_R1881_HOTAIR GSE61268.AR.LNCaP_R1881_HOTAIR 146 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 171 bp overlap
ChIP LNCaP_SHCTR_R1881 GSE37345.AR.LNCaP_SHCTR_R1881 174 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 181 bp overlap
ChIP LNCaP_SHGATA2 GSE52725.AR.LNCaP_SHGATA2 125 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 166 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 222 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 205 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 192 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 187 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 225 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 225 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 225 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 205 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 177 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 216 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 195 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 211 bp overlap
ARID1A 1 dataset
ChIP LNCaP_r1881 GSE94682.ARID1A.LNCaP_r1881 177 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 171 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 204 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 152 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 165 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 184 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 159 bp overlap
ETV1 1 dataset
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 80 bp overlap
FOXA1 73 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 225 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 225 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 185 bp overlap
ChIP HepG2 ENCFF207NVJ 219 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 225 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 204 bp overlap
ChIP LNCaP-C4-2B GSE40050.FOXA1.LNCaP-C4-2B 225 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 225 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 225 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 211 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 180 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 186 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 184 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 225 bp overlap
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 225 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 221 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 225 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 204 bp overlap
ChIP LNCaP_FA GSE114737.FOXA1.LNCaP_FA 198 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 225 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 197 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 224 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 206 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 214 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 170 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 225 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 212 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 207 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 225 bp overlap
ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 163 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 225 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 176 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 225 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 174 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 193 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 190 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 162 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 181 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 182 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 218 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 190 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 141 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 225 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 188 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 211 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 221 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 188 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 225 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 216 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 225 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 148 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 212 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 225 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 202 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 225 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 183 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 151 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 146 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 174 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 213 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 182 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 181 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 184 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 119 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 203 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 225 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 167 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 193 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 130 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 225 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 162 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 193 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 225 bp overlap
ChIP DE DE-FOXA2-2 225 bp overlap
Motif DE_36h DE_36h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF533COJ 225 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 222 bp overlap
FOXA3 1 dataset
Motif DE_36h DE_36h-FOXA3_MA1683.2 7 bp overlap
FOXC2 1 dataset
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
FOXF2 1 dataset
Motif DE_36h DE_36h-FOXF2_MA0030.2 9 bp overlap
FOXI1 1 dataset
Motif DE_36h DE_36h-FOXI1_MA0042.2 7 bp overlap
FOXN3 1 dataset
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
FOXP1 1 dataset
Motif DE_36h DE_36h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif DE_36h DE_36h-FOXP4_MA2117.1 7 bp overlap
Foxj3 1 dataset
Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 225 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 225 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HNF4A 1 dataset
Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap
HOXB13 2 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 129 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 192 bp overlap
IRF2 2 datasets
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 201 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 186 bp overlap
NANOG 3 datasets
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 214 bp overlap
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 173 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 225 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 50 bp overlap
NR4A1 1 dataset
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 175 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Nr2F6 1 dataset
Motif DE_36h DE_36h-Nr2F6_MA0728.1 15 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 201 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 225 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 225 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 158 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 112 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 135 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 187 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 110 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 159 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 206 bp overlap
STAT1 1 dataset
Motif DE_36h DE_36h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap
Stat4 1 dataset
Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap
Stat5b 1 dataset
Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0872.1 13 bp overlap
THAP1 1 dataset
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 223 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 225 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 161 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 225 bp overlap
ZNF143 2 datasets
ChIP K-562 GSE39263.ZNF143.K-562 209 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 223 bp overlap
ZNF320 1 dataset
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF549 2 datasets
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZSCAN31 1 dataset
Motif DE_36h DE_36h-ZSCAN31_MA1722.2 18 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap