chr11 : 62,382,190 62,383,008
818 bp 36 TFs 13 linked genes
This 818 bp open chromatin element is linked to 13 target genes and is bound by 36 transcription factors.
Linked Genes
13 genes
Link type
Gene Expression Dist. to TSS Distance Link type
ASRGL1 45.1 kb Distal Multiome
AHNAK 164.2 kb Distal Multiome+HiCAR
EEF1G 191.3 kb Distal Multiome+HiCAR
TUT1 208.9 kb Distal Multiome+HiCAR
MTA2 219.2 kb Distal Multiome
EML3 229.9 kb Distal Multiome
B3GAT3 239.4 kb Distal Multiome
INCENP 258.6 kb Distal Multiome
GANAB 264.0 kb Distal Multiome
INTS5 270.7 kb Distal Multiome
CSKMT 282.7 kb Distal Multiome
UQCC3 289.1 kb Distal Multiome
UBXN1 296.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:62,377,190 – 62,388,008
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 217 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 102 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 90 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 96 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 84 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 328 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 451 bp overlap
BRD4 5 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 315 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 87 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 129 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 366 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 418 bp overlap
CTCF 1 dataset
ChIP prostate gland ENCFF655GBO 341 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
FOXA1 11 datasets
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 508 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 205 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 265 bp overlap
ChIP HEK293T ENCFF568IEA 194 bp overlap
ChIP HepG2 ENCFF207NVJ 246 bp overlap
ChIP HepG2 ENCFF207NVJ 212 bp overlap
ChIP HepG2 ENCFF361KNY 222 bp overlap
ChIP HepG2 ENCFF740VZW 222 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 190 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 216 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 97 bp overlap
ChIP DE DE-FOXA2-1 818 bp overlap
ChIP DE DE-FOXA2-2 818 bp overlap
ChIP HepG2 ENCFF533COJ 233 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 621 bp overlap
GATA2 9 datasets
ChIP HepG2 ENCFF905PYM 293 bp overlap
ChIP K562 ENCFF088XQT 332 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 270 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 270 bp overlap
ChIP SH-SY5Y ENCFF485YIB 188 bp overlap
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 443 bp overlap
ChIP SK-N-SH ENCFF764OZD 356 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
GATA3 3 datasets
ChIP A549 ENCFF226FVV 361 bp overlap
ChIP SH-SY5Y ENCFF475HYF 363 bp overlap
ChIP SK-N-SH ENCFF040SSB 319 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 818 bp overlap
ChIP DE DE-GATA4-2 818 bp overlap
ChIP foregut GSE117136.GATA4.foregut 260 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 383 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 441 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 818 bp overlap
ChIP DE DE-GATA6-2 760 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 322 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 204 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 233 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 144 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 82 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 239 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 282 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 442 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 155 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 257 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 410 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 297 bp overlap
ChIP HEK293 ENCFF875BDB 90 bp overlap
POLR2A 2 datasets
ChIP prostate gland ENCFF832RQK 284 bp overlap
ChIP prostate gland ENCFF881OMH 209 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 280 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 352 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 346 bp overlap
ChIP SK-N-SH ENCFF518EXB 365 bp overlap
SOX13 2 datasets
ChIP HepG2 ENCFF062VSQ 341 bp overlap
ChIP HepG2 ENCFF062VSQ 262 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 625 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 674 bp overlap
SPI1 3 datasets
ChIP K-562 GSE70482.SPI1.K-562 172 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 166 bp overlap
ChIP K562 ENCFF410ORC 91 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 393 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 151 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 504 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 147 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 147 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 128 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 478 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 325 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCFF343DTU 230 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 376 bp overlap