chr11 : 21,861,184 – 21,861,614
430 bp 71 TFs 0 linked genes
This 430 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:21,856,184 – 21,866,614
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AR 8 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 126 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 166 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 164 bp overlap
ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 197 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 187 bp overlap
ChIP MDA-MB-453_MPA GSE74069.AR.MDA-MB-453_MPA 152 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 174 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 182 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 199 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 182 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 197 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 132 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 297 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 104 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 126 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 173 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 188 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 223 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 116 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 116 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 173 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 166 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 140 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 150 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 300 bp overlap
FOXA1 60 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 205 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 128 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 200 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 53 bp overlap
ChIP A1A3_Brg1KD_Dex GSE112491.FOXA1.A1A3_Brg1KD_Dex 165 bp overlap
ChIP A1A3_Dex GSE112491.FOXA1.A1A3_Dex 233 bp overlap
ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 87 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 102 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 207 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 173 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 141 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 124 bp overlap
ChIP MCF-7 GSE95302.FOXA1.MCF-7 90 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 70 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 189 bp overlap
ChIP MCF-7_DSG GSE114737.FOXA1.MCF-7_DSG 127 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 154 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 148 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 115 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 163 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 149 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 222 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 185 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 140 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 131 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 167 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 90 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 218 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 246 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 141 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 158 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 242 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 119 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 86 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 149 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 100 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 123 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 137 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 177 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 183 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 130 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 137 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 147 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 147 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 147 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 231 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 220 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 260 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 292 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 284 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 325 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 241 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 183 bp overlap
ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 392 bp overlap
ChIP breast-cancer_ICI GSE101407.FOXA1.breast-cancer_ICI 426 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 278 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 430 bp overlap
ChIP breast_tumor_Female_3 GSE104399.FOXA1.breast_tumor_Female_3 132 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 158 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 165 bp overlap
GATA2 4 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 80 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 80 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 77 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 185 bp overlap
GATA3 6 datasets
ChIP A1A3_Brg1KD_Dex GSE112491.GATA3.A1A3_Brg1KD_Dex 178 bp overlap
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 177 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 150 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 101 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 140 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 86 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 107 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 430 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 243 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 430 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 430 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 307 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 430 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 148 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 223 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 299 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 168 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 274 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 295 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 287 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 113 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 376 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 276 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 379 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 332 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 407 bp overlap
ChIP hESC GSE18292.NANOG.hESC 241 bp overlap
ChIP hESC GSE20650.NANOG.hESC 154 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NIPBL 3 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 255 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 367 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 196 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR338MMB.NR2F2.liver 153 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 173 bp overlap
NR3C1 5 datasets
ChIP MCF-7 GSE152203.NR3C1.MCF-7 168 bp overlap
ChIP MDA-MB-361 GSE152203.NR3C1.MDA-MB-361 106 bp overlap
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 95 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 284 bp overlap
ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 199 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 194 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 156 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 410 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 194 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 205 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 291 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 358 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 311 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 242 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 286 bp overlap
SMARCA4 4 datasets
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 189 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 214 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 263 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 343 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 253 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 430 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 221 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 246 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 430 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 274 bp overlap
ChIP hESC GSE18292.SOX2.hESC 97 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 140 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 91 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 277 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 290 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 239 bp overlap
TP53 1 dataset
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 129 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 152 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF410 1 dataset
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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