chr1 : 193,727,954 193,728,128
174 bp 82 TFs 0 linked genes
This 174 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:193,722,954 – 193,733,128
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CTCFL 1 dataset
Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 174 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
FOXA1 8 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 112 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 135 bp overlap
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 174 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 149 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 134 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 138 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 154 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 174 bp overlap
ChIP DE DE-FOXA2-2 174 bp overlap
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 174 bp overlap
FOXA3 1 dataset
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif ES_0h ES_0h-FOXD1_MA0031.2 7 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXG1 1 dataset
Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif ES_0h ES_0h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
ChIP H9 GSE31006.FOXP1.H9 154 bp overlap
FOXP2 1 dataset
Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif ES_0h ES_0h-Foxj3_MA0851.2 9 bp overlap
Foxo1 1 dataset
Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 138 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA6 1 dataset
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXD8 1 dataset
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
HOXD9 1 dataset
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
Hic1 1 dataset
Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap
Hmx1 1 dataset
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap
IRF2 1 dataset
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 164 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 135 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 174 bp overlap
ChIP H1 ENCFF747ZPQ 174 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 174 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 174 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 174 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 174 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 174 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 174 bp overlap
ChIP hESC GSE20650.NANOG.hESC 174 bp overlap
ChIP hESC GSE18292.NANOG.hESC 142 bp overlap
NFIA 1 dataset
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU5F1 3 datasets
ChIP GM23338 ENCFF333SNB 174 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 174 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 138 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 174 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 174 bp overlap
SMARCA4 2 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 163 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 157 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 174 bp overlap
SOX2 3 datasets
ChIP hESC GSE69479.SOX2.hESC 160 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 174 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 174 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 159 bp overlap
TBX20 1 dataset
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 174 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 174 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 174 bp overlap
ZNF528 1 dataset
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF582 1 dataset
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap