chr9 : 111,633,083 111,633,801
718 bp 51 TFs 3 linked genes
This 718 bp open chromatin element is linked to DNAJC25-GNG10, DNAJC25, and LRRC37A5P and is bound by 51 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
DNAJC25-GNG10 1.7 kb Proximal Proximity
DNAJC25 1.8 kb Proximal Proximity
LRRC37A5P 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:111,628,083 – 111,638,801
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ATF3 3 datasets
ChIP liver ENCFF375GID 417 bp overlap
ChIP liver ENCFF867MFZ 431 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 198 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 324 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 298 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 359 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 230 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 243 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 170 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 297 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 416 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 239 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 408 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 263 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 326 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 262 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP liver ENCFF749ERP 345 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 718 bp overlap
ChIP DE DE-FOXA2-2 718 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP liver ENCFF877SFI 214 bp overlap
ChIP liver ENCFF888VJF 345 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 210 bp overlap
GABPA 1 dataset
ChIP liver ENCFF500III 346 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 274 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 718 bp overlap
ChIP DE DE-GATA4-2 718 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 378 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 406 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 682 bp overlap
ChIP DE DE-GATA6-2 694 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 565 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 718 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 718 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 620 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 718 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 718 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 557 bp overlap
HNF4A 6 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 121 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF146SSF 361 bp overlap
ChIP liver ENCFF354NRH 375 bp overlap
ChIP liver ENCFF449HPV 426 bp overlap
ChIP liver ERP002306.HNF4A.liver 287 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 371 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 262 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 216 bp overlap
JUN 2 datasets
ChIP DE_D1 S13-DE-d1-JUN-exp1 271 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 267 bp overlap
JUND 2 datasets
ChIP liver ENCFF007WWT 421 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 168 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 221 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 309 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 186 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 317 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 126 bp overlap
MZF1 1 dataset
ChIP HepG2 ENCFF196JUX 371 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 474 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 302 bp overlap
OSR2 1 dataset
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 292 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 78 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 240 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 66 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 266 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 99 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 481 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 162 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 457 bp overlap
ChIP liver ENCFF522JHE 401 bp overlap
REST 1 dataset
ChIP liver ENCFF240FWT 472 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 219 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 254 bp overlap
ChIP liver ENCFF807CIA 339 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 315 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 479 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 317 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 344 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 539 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 462 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 381 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 347 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 247 bp overlap
ChIP liver ENCFF769YSM 157 bp overlap
TFAP4 1 dataset
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 123 bp overlap
YY1 3 datasets
ChIP liver ENCFF400MBC 591 bp overlap
ChIP liver ENCFF400MBC 400 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 263 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 336 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 220 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap