chr9 : 34,451,289 34,451,492
203 bp 49 TFs 2 linked genes
This 203 bp open chromatin element is linked to FAM219A and DNAI1 and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FAM219A 7.1 kb Proximal Proximity
DNAI1 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:34,446,289 – 34,456,492
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AHR 2 datasets
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 104 bp overlap
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 132 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 97 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 203 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 181 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 97 bp overlap
ChIP BLaER1 ENCFF460KDD 191 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 71 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 144 bp overlap
ERG 7 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 99 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 125 bp overlap
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 93 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 119 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 86 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 78 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 91 bp overlap
ESR1 2 datasets
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 129 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 75 bp overlap
ETS1 4 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 99 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 120 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 99 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 54 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 97 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 154 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 203 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 203 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 110 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 101 bp overlap
GRHL1 1 dataset
ChIP MCF-7 GSE140185.GRHL1.MCF-7 172 bp overlap
GRHL2 7 datasets
ChIP HBE GSE46194.GRHL2.HBE 128 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 171 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 162 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 203 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 203 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 186 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 175 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 168 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 198 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 203 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 148 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 135 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 203 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 102 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 104 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 185 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 203 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 203 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 191 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 193 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 104 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 118 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 124 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 111 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 144 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 52 bp overlap
ChIP K562 ENCFF506JCB 135 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 182 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 203 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 203 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 195 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 203 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 68 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 123 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 149 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 203 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 145 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 203 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 86 bp overlap
STAT3 4 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 142 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 201 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 129 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 192 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 176 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 203 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 203 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 135 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 139 bp overlap