chr1 : 171,480,132 – 171,480,349
217 bp 55 TFs 1 linked gene
This 217 bp open chromatin element is linked to PRRC2C and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PRRC2C 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:171,475,132 – 171,485,349
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 187 bp overlap
AR 1 dataset
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 92 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 173 bp overlap
ChIP K562 ENCFF938UXQ 217 bp overlap
ATF2 1 dataset
ChIP K562 ENCFF139ZZG 73 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 110 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 217 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 126 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 217 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 75 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 148 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF956TPS 208 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 215 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 198 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 217 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 100 bp overlap
ESR1 12 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 217 bp overlap
ChIP MCF-7_E2_SRC-3 GSE119702.ESR1.MCF-7_E2_SRC-3 181 bp overlap
ChIP MCF-7_SRC3 GSE119702.ESR1.MCF-7_SRC3 181 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 217 bp overlap
ChIP MCF-7_shFbxo GSE119702.ESR1.MCF-7_shFbxo 157 bp overlap
ChIP MCF-7_shFbxo_E2 GSE119702.ESR1.MCF-7_shFbxo_E2 157 bp overlap
ChIP MCF-7_shFbxo_E2_4OHT GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT 176 bp overlap
ChIP MCF-7_shFbxo_E2_4OHT_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT_SRC-3 148 bp overlap
ChIP MCF-7_shFbxo_E2_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_E2_SRC-3 217 bp overlap
ChIP MCF-7_shFbxo_OHT GSE119702.ESR1.MCF-7_shFbxo_OHT 176 bp overlap
ChIP MCF-7_shFbxo_OHT_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_OHT_SRC-3 148 bp overlap
ChIP MCF-7_shFbxo_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_SRC-3 217 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCFF282FWZ 207 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 188 bp overlap
GATA3 3 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 95 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 162 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 187 bp overlap
HOXB13 4 datasets
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 96 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 217 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 217 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 200 bp overlap
IRF2BP2 1 dataset
ChIP HEK293 GSE124636.IRF2BP2.HEK293 163 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 214 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 123 bp overlap
MAFF 5 datasets
ChIP HeLa-S3 ENCFF783SBT 217 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 217 bp overlap
ChIP HepG2 ENCFF452YUT 189 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 217 bp overlap
ChIP K562 ENCFF071YKK 208 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 217 bp overlap
ChIP K562 ENCFF455EEO 217 bp overlap
MAFK 15 datasets
ChIP A549 ENCFF371EPR 217 bp overlap
ChIP GM12878 ENCFF605LFT 214 bp overlap
ChIP H1 ENCFF854XWE 179 bp overlap
ChIP HeLa-S3 ENCFF304XGR 217 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 194 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 217 bp overlap
ChIP HepG2 ENCFF743ZOF 182 bp overlap
ChIP HepG2 ENCFF767LDG 139 bp overlap
ChIP IMR-90 ENCFF336DHZ 186 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 217 bp overlap
ChIP K562 ENCFF380WHM 206 bp overlap
ChIP MCF-7 ENCFF558JLG 217 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 217 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 168 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 217 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 106 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 163 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 151 bp overlap
NANOG 4 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 217 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 217 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 217 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 202 bp overlap
ChIP K562 ENCFF163BSI 217 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.NR3C1.HeLa-B2_P65KD_TA_TNFA 94 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 217 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 191 bp overlap
PKNOX1 3 datasets
ChIP HEK293T ENCFF174WDB 75 bp overlap
ChIP HEK293T ENCFF174WDB 217 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 217 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 146 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 194 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 217 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 217 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 144 bp overlap
RUNX1 1 dataset
ChIP SKH1 GSE87283.RUNX1.SKH1 151 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 101 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 217 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 217 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 186 bp overlap
SMARCB1 5 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 205 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 217 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 217 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 151 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 217 bp overlap
SMARCC1 2 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 193 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 63 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 135 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 149 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 217 bp overlap
TAL1 2 datasets
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 217 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 146 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 146 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 156 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 217 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 217 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 217 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 217 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 217 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 172 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 217 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 217 bp overlap
XBP1 1 dataset
ChIP LNCaP_px330 GSE121880.XBP1.LNCaP_px330 144 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 103 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 171 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 217 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 217 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 217 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 217 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 217 bp overlap
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