chr8 : 74,605,838 – 74,606,352
514 bp 104 TFs 4 linked genes
This 514 bp open chromatin element is linked to 4 target genes and is bound by 104 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MIR2052HG 6.1 kb Proximal Proximity
GDAP1 255.7 kb Distal Multiome
ENSG00000253706 260.8 kb Distal Multiome
JPH1 284.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:74,600,838 – 74,611,352
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
BARX1 2 datasets
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BARX2 1 dataset
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
BCL6B 4 datasets
Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
Motif DE_72h DE_72h-BCL6B_MA0731.1 17 bp overlap
BSX 2 datasets
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
CUX1 2 datasets
Motif DE_36h DE_36h-CUX1_MA0754.3 9 bp overlap
Motif DE_60h DE_60h-CUX1_MA0754.3 9 bp overlap
DLX1 2 datasets
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 212 bp overlap
DMRTA2 1 dataset
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
Dlx2 2 datasets
Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap
Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap
Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap
ERF::FOXI1 1 dataset
Motif DE_48h DE_48h-ERFFOXI1_MA1935.2 10 bp overlap
ETV5::FOXI1 4 datasets
Motif DE_36h DE_36h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_72h DE_72h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV5::HOXA2 2 datasets
Motif DE_36h DE_36h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif DE_60h DE_60h-ETV5HOXA2_MA1948.2 12 bp overlap
FIGLA 2 datasets
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
Motif DE_48h DE_48h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 514 bp overlap
ChIP DE DE-FOXA2-2 514 bp overlap
Motif DE_48h DE_48h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_48h DE_48h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_48h DE_48h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
FOXF2 1 dataset
Motif DE_48h DE_48h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_48h DE_48h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_48h DE_48h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_48h DE_48h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_48h DE_48h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_48h DE_48h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_48h DE_48h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_48h DE_48h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_48h DE_48h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_48h DE_48h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_48h DE_48h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_48h DE_48h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_48h DE_48h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_48h DE_48h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_48h DE_48h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 485 bp overlap
ChIP DE DE-GATA4-2 514 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 514 bp overlap
ChIP DE DE-GATA6-2 514 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 384 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 432 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 425 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap
GBX2 2 datasets
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Gli1 1 dataset
Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap
HESX1 2 datasets
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HMBOX1 1 dataset
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
HOXA6 2 datasets
Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap
Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap
HOXA7 2 datasets
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
HOXB6 2 datasets
Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap
Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap
HOXB7 2 datasets
Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap
Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap
Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap
HOXD8 2 datasets
Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap
Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap
HOXD9 2 datasets
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Hmx1 2 datasets
Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap
Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap
Hmx2 2 datasets
Motif DE_36h DE_36h-Hmx2_MA0897.2 15 bp overlap
Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap
Hmx3 2 datasets
Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap
Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap
IKZF1 1 dataset
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
IRF7 2 datasets
Motif DE_48h DE_48h-IRF7_MA0772.2 13 bp overlap
Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap
LBX2 2 datasets
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
MSX1 2 datasets
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
Mecom 2 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Msx3 2 datasets
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
NFXL1 1 dataset
ChIP K562 ENCFF898RYR 159 bp overlap
Nobox 2 datasets
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
ONECUT3 2 datasets
Motif DE_36h DE_36h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
PHOX2A 2 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
RAX 2 datasets
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
RBPJ 4 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 514 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 366 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 267 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 514 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 514 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 409 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 514 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 514 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 326 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 356 bp overlap
SP1 1 dataset
Motif DE_48h DE_48h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap
SRY 1 dataset
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
STAT1 1 dataset
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
Spi1 1 dataset
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
Stat2 2 datasets
Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
Stat4 1 dataset
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
Stat5a 2 datasets
Motif DE_36h DE_36h-Stat5a_MA1624.2 9 bp overlap
Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 4 datasets
Motif DE_36h DE_36h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_48h DE_48h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_60h DE_60h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_72h DE_72h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 4 datasets
Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap
Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
Motif DE_72h DE_72h-Stat5b_MA1625.2 9 bp overlap
Stat6 4 datasets
Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap
Motif DE_72h DE_72h-Stat6_MA0520.2 10 bp overlap
TBX20 2 datasets
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TCF4 2 datasets
Motif DE_36h DE_36h-TCF4_MA0830.3 8 bp overlap
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
Thap11 4 datasets
Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap
Motif DE_48h DE_48h-Thap11_MA1573.2 14 bp overlap
Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap
Motif DE_72h DE_72h-Thap11_MA1573.2 14 bp overlap
VEZF1 1 dataset
Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap
ZBTB12 1 dataset
Motif DE_48h DE_48h-ZBTB12_MA1649.2 7 bp overlap
ZEB1 2 datasets
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZNF136 2 datasets
Motif DE_36h DE_36h-ZNF136_MA1588.1 15 bp overlap
Motif DE_60h DE_60h-ZNF136_MA1588.1 15 bp overlap
ZNF143 2 datasets
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF354C 4 datasets
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_72h DE_72h-ZNF354C_MA0130.1 6 bp overlap
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