chr8 : 53,615,556 53,616,127
571 bp 80 TFs 0 linked genes
This 571 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:53,610,556 – 53,621,127
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 180 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 168 bp overlap
ASCL1 3 datasets
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 131 bp overlap
BRD4 4 datasets
ChIP BE2C GSE80151.BRD4.BE2C 393 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 393 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 288 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 464 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF460KDD 263 bp overlap
ChIP BLaER1 ENCFF896HSY 251 bp overlap
ChIP BLaER1 ENCFF896HSY 118 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 156 bp overlap
ESR1 45 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ChIP MCF-7 ENCFF004AKH 229 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 223 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 232 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 172 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 177 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 206 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 180 bp overlap
ChIP MCF-7 GSE95302.ESR1.MCF-7 198 bp overlap
ChIP MCF-7_800 GSE115607.ESR1.MCF-7_800 282 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 206 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 148 bp overlap
ChIP MCF-7_E2 GSE115607.ESR1.MCF-7_E2 324 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 152 bp overlap
ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 179 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 222 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 120 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 161 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 140 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 162 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 229 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 257 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 242 bp overlap
ChIP MCF-7_H3B-6545 GSE115607.ESR1.MCF-7_H3B-6545 267 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 219 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 213 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 278 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 259 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 279 bp overlap
ChIP MCF-7_RAD1901 GSE115607.ESR1.MCF-7_RAD1901 308 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 183 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 139 bp overlap
ChIP MCF-7_Sat-H3B-6545 GSE115607.ESR1.MCF-7_Sat-H3B-6545 230 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.ESR1.MCF-7_TNFa_45m 191 bp overlap
ChIP MCF-7_Tamoxifen GSE115607.ESR1.MCF-7_Tamoxifen 199 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 195 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 179 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 214 bp overlap
ChIP MCF-7_s5942 GSE115607.ESR1.MCF-7_s5942 276 bp overlap
ChIP MCF-7_talen GSE94493.ESR1.MCF-7_talen 160 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 234 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 161 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 269 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 210 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 144 bp overlap
ESR1_Y537N 5 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537N.MCF-7_E2 150 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 158 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 253 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 238 bp overlap
ChIP MCF-7_talen GSE94493.ESR1_Y537N.MCF-7_talen 210 bp overlap
ESR1_Y537S 3 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 255 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 220 bp overlap
ChIP T-47D_dox GSE94493.ESR1_Y537S.T-47D_dox 155 bp overlap
FERD3L 1 dataset
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 340 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 571 bp overlap
ChIP DE DE-FOXA2-2 551 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 308 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
GATA1 15 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 94 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 178 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 143 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 152 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 56 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 284 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 143 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 241 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 229 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
ChIP erythroblast ENCFF867JAR 553 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 436 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 189 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 263 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 275 bp overlap
GATA2 8 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 174 bp overlap
ChIP K562 ENCFF513FTZ 301 bp overlap
ChIP SH-SY5Y ENCFF485YIB 177 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 411 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 342 bp overlap
GATA3 7 datasets
ChIP BE2C GSE65664.GATA3.BE2C 276 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 282 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 140 bp overlap
ChIP NGP GSE65664.GATA3.NGP 253 bp overlap
ChIP SH-SY5Y ENCFF475HYF 481 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 219 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 467 bp overlap
ChIP DE DE-GATA4-2 536 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 489 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 484 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 571 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 19 datasets
ChIP AGS GSE51705.GATA6.AGS 226 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 435 bp overlap
ChIP DE DE-GATA6-2 510 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 490 bp overlap
ChIP H9 ERP004206.GATA6.H9 274 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 418 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 349 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 125 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 247 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 171 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 309 bp overlap
ChIP foregut GSE117136.GATA6.foregut 546 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 416 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 460 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 472 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 536 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 278 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 378 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 257 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 190 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 187 bp overlap
IKZF1 1 dataset
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
IRF3 1 dataset
Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap
Irf1 1 dataset
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 226 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 329 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 409 bp overlap
MAFA 1 dataset
Motif DE_60h DE_60h-MAFA_MA1521.2 13 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 236 bp overlap
MYOG 2 datasets
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap
NHLH1 2 datasets
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 261 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 117 bp overlap
ChIP breast_tumor_Male_15 GSE104399.NR3C1.breast_tumor_Male_15 343 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 173 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Nfat5 1 dataset
Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 258 bp overlap
ONECUT3 1 dataset
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
Olig2 2 datasets
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PAX3 1 dataset
Motif DE_60h DE_60h-PAX3_MA0780.1 10 bp overlap
Pax7 1 dataset
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
Prdm5 1 dataset
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 120 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 181 bp overlap
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 206 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 204 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 232 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 388 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 317 bp overlap
TAL1 7 datasets
ChIP CD34 GSE52924.TAL1.CD34 174 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 92 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 262 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 163 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 147 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 178 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 258 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 420 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 420 bp overlap
Tcf12 2 datasets
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZNF184 2 datasets
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
ChIP K-562 ENCSR621ATC.ZNF184.K-562 305 bp overlap
ZNF416 1 dataset
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF680 1 dataset
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
ZNF701 1 dataset
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF93 2 datasets
Motif DE_60h DE_60h-ZNF93_MA1721.2 14 bp overlap
Motif DE_60h DE_60h-ZNF93_MA1721.2 14 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap