chr1 : 159,208,469 159,208,705
236 bp 47 TFs 0 linked genes
This 236 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:159,203,469 – 159,213,705
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
ATF4 1 dataset
ChIP K562 ENCFF674KTF 138 bp overlap
BRD4 1 dataset
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 148 bp overlap
CTCFL 1 dataset
Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 72 bp overlap
EZH2 1 dataset
ChIP A-673 ENCSR179SAO.EZH2.A-673 185 bp overlap
GABPA 2 datasets
ChIP K562 ENCFF139LXS 149 bp overlap
ChIP K562 ENCFF139LXS 236 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 125 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 124 bp overlap
KLF1 1 dataset
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 50 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 216 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PRDM9 2 datasets
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
REST 29 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 236 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 236 bp overlap
ChIP A549 ENCFF148AIS 236 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 236 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 190 bp overlap
ChIP GM23338 ENCFF024TCL 177 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 236 bp overlap
ChIP H1 ENCFF203SWY 56 bp overlap
ChIP H1 ENCFF203SWY 106 bp overlap
ChIP H1 ENCFF429RUE 159 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 236 bp overlap
ChIP HeLa-S3 ENCFF911DTC 148 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 236 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 115 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 236 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 236 bp overlap
ChIP K562 ENCFF430APM 161 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 143 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 236 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 89 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 236 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 236 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 171 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 204 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 236 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 236 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 236 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 236 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 236 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 236 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 68 bp overlap
ChIP H1 ENCFF042ZSL 236 bp overlap
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 81 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 121 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 111 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 83 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 85 bp overlap
SP1 1 dataset
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP8 1 dataset
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 236 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 236 bp overlap
VEZF1 2 datasets
ChIP K562 ENCFF053XDV 141 bp overlap
ChIP K562 ENCFF053XDV 236 bp overlap
ZBTB40 2 datasets
ChIP K562 ENCFF337GJB 165 bp overlap
ChIP K562 ENCFF337GJB 236 bp overlap
ZNF148 2 datasets
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ChIP K-562 ENCSR018MSO.ZNF148.K-562 75 bp overlap
ZNF175 1 dataset
ChIP K562 ENCFF497AEJ 212 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 194 bp overlap