chr6 : 166,223,160 166,223,659
499 bp 68 TFs 1 linked gene
This 499 bp open chromatin element is linked to ENSG00000280991 and is bound by 68 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000280991 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:166,218,160 – 166,228,659
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
BRD4 9 datasets
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 182 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 161 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 234 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 234 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 161 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 106 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 192 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 80 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 192 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CTCF 8 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP Loucy ENCFF359TVQ 219 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 117 bp overlap
ChIP SEM GSE117864.CTCF.SEM 106 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 134 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 94 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 282 bp overlap
CTNNB1 2 datasets
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 473 bp overlap
ChIP hiPSC_TT-neg_D2 GSE132532.CTNNB1.hiPSC_TT-neg_D2 241 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 165 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 220 bp overlap
ESR1 1 dataset
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 85 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 133 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 51 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 247 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 150 bp overlap
GATA2 1 dataset
Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap
GATA4 2 datasets
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 248 bp overlap
GATA6 6 datasets
Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 499 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 499 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 499 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 499 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 240 bp overlap
Gata3 1 dataset
Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap
IRF1 2 datasets
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 252 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 60 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 499 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 499 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 499 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 150 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 201 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 168 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 249 bp overlap
KMT2B-D 2 datasets
ChIP SW480 GSE115985.KMT2B-D.SW480 160 bp overlap
ChIP SW480 GSE115985.KMT2B-D.SW480 141 bp overlap
MAF 1 dataset
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 115 bp overlap
MYB 3 datasets
ChIP DU528 GSE94000.MYB.DU528 164 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 290 bp overlap
ChIP SEM GSE117864.MYB.SEM 152 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 247 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 142 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 146 bp overlap
ChIP K562 ENCFF674RQA 266 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 166 bp overlap
Nkx3-1 1 dataset
Motif DE_12h DE_12h-Nkx3-1_MA0124.3 7 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 499 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 268 bp overlap
RELA 2 datasets
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 125 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 78 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX1 3 datasets
ChIP 697 GSE138031.RUNX1.697 237 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 248 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 209 bp overlap
RUNX2 1 dataset
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 499 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 499 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 499 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 277 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 204 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 173 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 244 bp overlap
TCF7L2 4 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 228 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 246 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 499 bp overlap
TP53 4 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 152 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 237 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 158 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 179 bp overlap
TRPS1 1 dataset
Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 229 bp overlap
ChIP K562 ENCFF053XDV 499 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF911VPU 234 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 135 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 237 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF133 1 dataset
ChIP HEK293T GSE78099.ZNF133.HEK293T 109 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF3 1 dataset
ChIP K562 ENCFF410DHO 145 bp overlap
ZNF341 7 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ChIP HEK293 ENCFF944VMC 233 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 250 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 149 bp overlap
ChIP HIES_EBV-B_ZNF341_isoform1 GSE113194.ZNF341.HIES_EBV-B_ZNF341_isoform1 244 bp overlap
ChIP HIES_EBV-B_ZNF341_isoform2 GSE113194.ZNF341.HIES_EBV-B_ZNF341_isoform2 279 bp overlap
ChIP LBCL_EBV-transformed GSE107719.ZNF341.LBCL_EBV-transformed 293 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap