chr1 : 146,409,460 146,409,726
266 bp 52 TFs 1 linked gene
This 266 bp open chromatin element is linked to RNVU1-25 and is bound by 52 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RNVU1-25 175 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:146,404,460 – 146,414,726
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
CEBPG 2 datasets
ChIP K562 ENCFF783ADE 266 bp overlap
ChIP K562 ENCFF783ADE 68 bp overlap
CREB1 4 datasets
ChIP HepG2 ENCFF576ERP 266 bp overlap
ChIP HepG2 ENCFF576ERP 71 bp overlap
ChIP K562 ENCFF175LMX 266 bp overlap
ChIP K562 ENCFF175LMX 100 bp overlap
CREM 1 dataset
ChIP K562 ENCFF180STA 179 bp overlap
E2F6 1 dataset
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
EGR3 1 dataset
Motif DE_24h DE_24h-EGR3_MA0732.2 11 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 174 bp overlap
GABPB1 2 datasets
ChIP HepG2 ENCFF315AWN 236 bp overlap
ChIP HepG2 ENCFF315AWN 111 bp overlap
GTF2A2 1 dataset
ChIP K562 ENCFF041WRN 108 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 266 bp overlap
GZF1 1 dataset
ChIP HepG2 ENCFF060TLH 101 bp overlap
IRF2 1 dataset
Motif DE_24h DE_24h-IRF2_MA0051.2 16 bp overlap
Irf1 1 dataset
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MZF1 1 dataset
Motif DE_24h DE_24h-MZF1_MA0056.3 8 bp overlap
NFYB 1 dataset
ChIP HepG2 ENCFF174VYX 192 bp overlap
NFYC 1 dataset
ChIP HepG2 ENCFF836FYP 266 bp overlap
PATZ1 1 dataset
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PKNOX2 1 dataset
Motif DE_24h DE_24h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 4 datasets
ChIP K562 ENCFF215CWW 149 bp overlap
ChIP K562 ENCFF836GHX 82 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 77 bp overlap
ChIP vagina ENCFF384GAB 238 bp overlap
PRDM1 2 datasets
ChIP A549 ENCFF012KDW 233 bp overlap
Motif DE_24h DE_24h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF967GRF 71 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 232 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 266 bp overlap
SIX2 1 dataset
Motif DE_24h DE_24h-SIX2_MA1119.2 11 bp overlap
SNAPC2 1 dataset
ChIP HepG2 ENCFF237IWR 86 bp overlap
SNAPC5 1 dataset
ChIP HepG2 ENCFF853IKB 52 bp overlap
SP4 1 dataset
ChIP HepG2 ENCFF865DSQ 57 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TCF7L2 1 dataset
ChIP HCT116 ENCFF038POZ 109 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 266 bp overlap
TGIF1 1 dataset
Motif DE_24h DE_24h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_24h DE_24h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_24h DE_24h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_24h DE_24h-TGIF2LY_MA1572.1 12 bp overlap
USF1 4 datasets
ChIP HCT116 ENCFF330PYP 266 bp overlap
ChIP HepG2 ENCFF201JKA 262 bp overlap
ChIP HepG2 ENCFF807KYJ 182 bp overlap
ChIP K562 ENCFF633EZB 217 bp overlap
VEZF1 2 datasets
ChIP K562 ENCFF053XDV 266 bp overlap
ChIP K562 ENCFF053XDV 53 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 63 bp overlap
ZEB1 1 dataset
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 85 bp overlap
ZNF610 1 dataset
Motif DE_24h DE_24h-ZNF610_MA1713.2 10 bp overlap
ZNF93 1 dataset
Motif DE_24h DE_24h-ZNF93_MA1721.2 14 bp overlap