chr6 : 136,640,482 – 136,640,881

399 bp 80 TFs 0 linked genes

This 399 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

80 transcription factors

AR 1 dataset

ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 283 bp overlap

ATF3 1 dataset

ChIP primary-dermal-fibroblasts_overexpressed GSE81403.ATF3.primary-dermal-fibroblasts_overexpressed 266 bp overlap

BCL3 1 dataset

ChIP GM12878 ENCFF854PAY 301 bp overlap

BCL6 1 dataset

Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap

BCL6B 1 dataset

Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap

BHLHE40 1 dataset

ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 219 bp overlap

CEBPB 2 datasets

ChIP IMR-90 ENCFF468UGY 191 bp overlap

ChIP hMSC GSE68864.CEBPB.hMSC 166 bp overlap

CTCF 1 dataset

ChIP Panc1 ENCFF056JQX 110 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF896HSY 247 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF2 1 dataset

Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

ELK1::HOXA1 1 dataset

Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap

ERF::FIGLA 1 dataset

Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap

ERF::FOXO1 1 dataset

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOS 2 datasets

ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 141 bp overlap

ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 217 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 1 dataset

Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA2 1 dataset

ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 174 bp overlap

HOXB2::ELK1 1 dataset

Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap

HOXC12 1 dataset

Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap

HOXD11 1 dataset

Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

IRF7 1 dataset

Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap

JUN 2 datasets

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 286 bp overlap

ChIP Karpas-299 GSE151413.JUN.Karpas-299 291 bp overlap

MAFK 1 dataset

ChIP IMR-90 ENCFF336DHZ 218 bp overlap

MED1 7 datasets

ChIP SGBS GSE64233.MED1.SGBS 191 bp overlap

ChIP U-87MG GSE36354.MED1.U-87MG 230 bp overlap

ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 216 bp overlap

ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 352 bp overlap

ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 286 bp overlap

ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 254 bp overlap

ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 217 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MXI1 1 dataset

ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 116 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

NANOG 2 datasets

ChIP WA01 ERP004238.NANOG.WA01 229 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 307 bp overlap

PGR 1 dataset

ChIP AB32 GSE31129.PGR.AB32 399 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

POLR2A 1 dataset

ChIP gastroesophageal sphincter ENCFF070PCA 251 bp overlap

PPARG 2 datasets

ChIP ASC GSE21366.PPARG.ASC 276 bp overlap

ChIP SGBS GSE41629.PPARG.SGBS 399 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RAD21 1 dataset

ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 175 bp overlap

RARA::RXRG 1 dataset

Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap

RCOR1 1 dataset

ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 168 bp overlap

RELA 1 dataset

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 207 bp overlap

RXR 1 dataset

ChIP macrophage ERP008801.RXR.macrophage 145 bp overlap

SMARCA4 3 datasets

ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 140 bp overlap

ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 223 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap

SMC3 1 dataset

ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 121 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SPI1 5 datasets

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 206 bp overlap

ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 198 bp overlap

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 182 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 110 bp overlap

ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 174 bp overlap

SPIB 2 datasets

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

SPIC 1 dataset

Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap

Spi1 2 datasets

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

TBX20 1 dataset

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

TEAD1 1 dataset

ChIP adipocyte GSE140782.TEAD1.adipocyte 246 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

ZBTB32 1 dataset

Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap

ZBTB40 7 datasets

ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 65 bp overlap

ChIP K-562 ENCSR237VLT.ZBTB40.K-562 247 bp overlap

ChIP K562 ENCFF337GJB 165 bp overlap

ChIP K562 ENCFF521DSV 139 bp overlap

ChIP K562 ENCFF952IUD 53 bp overlap

ChIP MCF-7 ENCFF044DWL 79 bp overlap

ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 55 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZNF175 1 dataset

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF449 1 dataset

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap