chr6 : 127,117,271 – 127,117,777
506 bp 55 TFs 2 linked genes
This 506 bp open chromatin element is linked to ENSG00000293110 and RSPO3 and is bound by 55 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000293110 1.2 kb Proximal Proximity
RSPO3 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:127,112,271 – 127,122,777
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 506 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 399 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 118 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 306 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CHD1 3 datasets
ChIP A-549 ENCSR398YBM.CHD1.A-549 251 bp overlap
ChIP A-549 ENCSR398YBM.CHD1.A-549 117 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 231 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 146 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D17 GSE139377.ERG.aortic-endothelial-cell_D17 206 bp overlap
EZH2 17 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 388 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 441 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 402 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 413 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 136 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 284 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 302 bp overlap
ChIP T98G GSE112240.EZH2.T98G 224 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 313 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 506 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 282 bp overlap
ChIP fibroblast of lung ENCFF479BAW 506 bp overlap
ChIP hepatocyte ENCFF552DZB 404 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 506 bp overlap
ChIP neural progenitor cell ENCFF018MKA 468 bp overlap
ChIP neural progenitor cell ENCFF018MKA 265 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 171 bp overlap
EZH2_phosphoT487 1 dataset
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 65 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 53 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 338 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 310 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HDAC2 2 datasets
ChIP A-549 ENCSR659LJJ.HDAC2.A-549 69 bp overlap
ChIP A549 ENCFF195CCI 62 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 206 bp overlap
JARID2 4 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 321 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 506 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 506 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 348 bp overlap
JUN 3 datasets
ChIP A549 ENCFF191QZG 506 bp overlap
ChIP A549 ENCFF191QZG 103 bp overlap
ChIP A549 ENCFF846DUV 360 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 109 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 308 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 264 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 391 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 147 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 147 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 333 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 363 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 200 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 364 bp overlap
ChIP H1 ENCFF881NFR 496 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 142 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 173 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
U2AF2 2 datasets
ChIP Hep-G2 GSE120104.U2AF2.Hep-G2 137 bp overlap
ChIP Hep-G2 ENCSR991ADX.U2AF2.Hep-G2 124 bp overlap
ZBTB18 2 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF143 1 dataset
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 140 bp overlap
ZNF263 2 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 132 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 136 bp overlap
ZNF512 1 dataset
ChIP HepG2 ENCFF113IGR 236 bp overlap
ZNF547 2 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
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