chr6 : 114,011,508 114,012,094
586 bp 90 TFs 0 linked genes
This 586 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:114,006,508 – 114,017,094
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 232 bp overlap
BRD4 1 dataset
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 216 bp overlap
CDX2 2 datasets
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 149 bp overlap
Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap
CUX1 1 dataset
Motif DE_36h DE_36h-CUX1_MA0754.3 9 bp overlap
EPAS1 1 dataset
Motif DE_36h DE_36h-EPAS1_MA2325.1 9 bp overlap
ERF 1 dataset
Motif DE_36h DE_36h-ERF_MA0760.2 9 bp overlap
ETS1 1 dataset
Motif DE_36h DE_36h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_36h DE_36h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_36h DE_36h-ETV2_MA0762.2 9 bp overlap
Erg 1 dataset
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 454 bp overlap
ChIP DE DE-FOXA2-2 453 bp overlap
FOXD2 1 dataset
Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap
FOXF2 2 datasets
Motif DE_36h DE_36h-FOXF2_MA0030.2 9 bp overlap
Motif DE_36h DE_36h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_36h DE_36h-FOXG1_MA0613.1 8 bp overlap
FOXH1 1 dataset
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
FOXK1 2 datasets
Motif DE_36h DE_36h-FOXK1_MA0852.3 7 bp overlap
Motif DE_36h DE_36h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_36h DE_36h-FOXK2_MA1103.3 7 bp overlap
Motif DE_36h DE_36h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_36h DE_36h-FOXL1_MA0033.2 7 bp overlap
Motif DE_36h DE_36h-FOXL1_MA0033.2 7 bp overlap
FOXO4 2 datasets
Motif DE_36h DE_36h-FOXO4_MA0848.1 7 bp overlap
Motif DE_36h DE_36h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap
FOXP3 2 datasets
Motif DE_36h DE_36h-FOXP3_MA0850.1 7 bp overlap
Motif DE_36h DE_36h-FOXP3_MA0850.1 7 bp overlap
Foxf1 2 datasets
Motif DE_36h DE_36h-Foxf1_MA1606.2 7 bp overlap
Motif DE_36h DE_36h-Foxf1_MA1606.2 7 bp overlap
Foxj3 1 dataset
Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap
Foxo1 2 datasets
Motif DE_36h DE_36h-Foxo1_MA0480.3 7 bp overlap
Motif DE_36h DE_36h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_36h DE_36h-Foxo3_MA0157.4 7 bp overlap
Motif DE_36h DE_36h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
GABPA 1 dataset
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 463 bp overlap
ChIP DE DE-GATA4-2 539 bp overlap
ChIP foregut GSE117136.GATA4.foregut 269 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 326 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 127 bp overlap
ChIP DE DE-GATA6-1 458 bp overlap
ChIP DE DE-GATA6-2 586 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 543 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 586 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 586 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 504 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 499 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 269 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 233 bp overlap
ChIP foregut GSE117136.GATA6.foregut 271 bp overlap
GRHL2 2 datasets
Motif DE_36h DE_36h-GRHL2_MA1105.3 8 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 158 bp overlap
HIF1A 1 dataset
Motif DE_36h DE_36h-HIF1A_MA1106.2 6 bp overlap
HMBOX1 1 dataset
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
HNF4A 2 datasets
Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 203 bp overlap
Hnf1A 1 dataset
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Mecom 1 dataset
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap
NFIB 1 dataset
Motif DE_36h DE_36h-NFIB_MA1643.2 17 bp overlap
NFIC 1 dataset
Motif DE_36h DE_36h-NFIC_MA1527.2 15 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA1528.2 14 bp overlap
NR5A1 1 dataset
Motif DE_36h DE_36h-NR5A1_MA1540.3 12 bp overlap
Nr2e1 1 dataset
Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap
PAX6 1 dataset
Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 2 datasets
ChIP prostate gland ENCFF881OMH 123 bp overlap
ChIP stomach ENCFF607ZPU 325 bp overlap
PRDM1 1 dataset
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
Pgr 1 dataset
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
SMAD2 1 dataset
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 351 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 575 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 502 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 336 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 442 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 450 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 144 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S10-DE-d1-BAF155-exp1 186 bp overlap
SOX10 2 datasets
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 338 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 391 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 76 bp overlap
Stat4 1 dataset
Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap
TBX19 1 dataset
Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 120 bp overlap
TBXT 1 dataset
Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap
TCF7L2 2 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
ChIP HEK293 ENCFF513JQN 347 bp overlap
TEAD1 1 dataset
Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_36h DE_36h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_36h DE_36h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap
TP53 1 dataset
Motif DE_36h DE_36h-TP53_MA0106.3 18 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF265CEM 523 bp overlap
ChIP HEK293 ENCFF582MWI 520 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 154 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 145 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZNF175 1 dataset
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF341 1 dataset
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
ZNF75A 1 dataset
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap