chr6 : 31,715,287 31,715,604
317 bp 61 TFs 4 linked genes
This 317 bp open chromatin element is linked to 4 target genes and is bound by 61 transcription factors.
Linked Genes
4 genes
Distance
Gene Expression Dist. to TSS Distance Link type
LY6G6D at TSS At TSS Proximity
ENSG00000204422 1.2 kb Proximal Proximity
ENSG00000293479 1.2 kb Proximal Proximity
LY6G6E 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:31,710,287 – 31,720,604
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 131 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 212 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 197 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 301 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 128 bp overlap
BRD4 5 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 317 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 184 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 203 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 81 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 230 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 171 bp overlap
CTCF 1 dataset
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 205 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 141 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 61 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 91 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 55 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 216 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF940JZP 317 bp overlap
HDAC6 1 dataset
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 107 bp overlap
HNRNPLL 4 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 290 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 290 bp overlap
ChIP HepG2 ENCFF355PIC 317 bp overlap
ChIP HepG2 ENCFF355PIC 151 bp overlap
HOXB13 1 dataset
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 64 bp overlap
HOXD1 1 dataset
ChIP HepG2 ENCFF462DCD 284 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 92 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 199 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 99 bp overlap
MAX 1 dataset
ChIP K562 ENCFF398VJM 235 bp overlap
MAZ 4 datasets
ChIP HEK293 ENCFF994GSG 274 bp overlap
ChIP HEK293 ENCFF994GSG 317 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 215 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 67 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 167 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 169 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 290 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 171 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 56 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 77 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 145 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 187 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 317 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 286 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 134 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 261 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 317 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 161 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 188 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 317 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 317 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 317 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 111 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 317 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 258 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 256 bp overlap
TAF15 5 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 256 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 255 bp overlap
ChIP HepG2 ENCFF116QSW 317 bp overlap
ChIP HepG2 ENCFF406BOT 317 bp overlap
ChIP K-562 ENCSR047LSJ.TAF15.K-562 220 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 151 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 136 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 150 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 100 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 207 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 281 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 60 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 141 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 133 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 66 bp overlap
ZFX 2 datasets
ChIP HEK293T ENCFF402JZW 317 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 317 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 178 bp overlap
ZMYND8 1 dataset
ChIP HEK293 GSE81696.ZMYND8.HEK293 253 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 136 bp overlap
ZNF225 1 dataset
ChIP HepG2 ENCFF500HTT 201 bp overlap
ZNF263 1 dataset
ChIP K562 ENCFF640RNA 317 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 143 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 317 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 283 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 317 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 59 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 317 bp overlap
ChIP HepG2 ENCFF653WIX 299 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 133 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 106 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 317 bp overlap