chr6 : 26,249,068 26,249,398
330 bp 50 TFs 3 linked genes
This 330 bp open chromatin element is linked to H3C7, H2BC9, and H4C6 and is bound by 50 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
H3C7 1.2 kb Proximal Proximity
H2BC9 2.2 kb Proximal Proximity
H4C6 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:26,244,068 – 26,254,398
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 70 bp overlap
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 330 bp overlap
ARID1A 1 dataset
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 149 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF419VIM 122 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 100 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 246 bp overlap
BRD2 4 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 51 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 51 bp overlap
ChIP SUM149PT_R_JQ1 GSE131097.BRD2.SUM149PT_R_JQ1 170 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 256 bp overlap
BRD4 7 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 330 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 232 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 99 bp overlap
ChIP OCI-AML3_JQ1_500nM_24h GSE104745.BRD4.OCI-AML3_JQ1_500nM_24h 61 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 125 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 71 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 149 bp overlap
CEBPA 4 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 249 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 188 bp overlap
ChIP T-47D_siCEBPA GSE132649.CEBPA.T-47D_siCEBPA 245 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 282 bp overlap
CEBPB 12 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 127 bp overlap
ChIP GM12878 ENCFF942VJF 173 bp overlap
ChIP H1 ENCFF871PTR 178 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 138 bp overlap
ChIP IMR-90 ENCFF468UGY 171 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 126 bp overlap
ChIP K562 ENCFF189VBN 182 bp overlap
ChIP K562 ENCFF584CTB 320 bp overlap
ChIP MCF-7 ENCFF772ZTQ 188 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 125 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 241 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 67 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF998XEK 105 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 157 bp overlap
CTCF 1 dataset
ChIP Peyer's patch ENCFF828IDE 82 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF031ISE 177 bp overlap
ChIP BLaER1 ENCFF093OYK 218 bp overlap
ChIP BLaER1 ENCFF335XTP 268 bp overlap
ChIP BLaER1 ENCFF364PUR 244 bp overlap
ChIP BLaER1 ENCFF896HSY 152 bp overlap
EZH2 1 dataset
ChIP fibroblast of lung ENCFF479BAW 189 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 223 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 93 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 163 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 330 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 251 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 79 bp overlap
KMT2A 2 datasets
ChIP L826 GSE83671.KMT2A.L826 61 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 198 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 73 bp overlap
MED1 1 dataset
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 81 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 199 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 330 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 244 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 142 bp overlap
PML 1 dataset
ChIP MCF-7 ENCSR000BUZ.PML.MCF-7 81 bp overlap
POLR2A 9 datasets
ChIP GM12878 ENCFF412KAE 294 bp overlap
ChIP GM19099 ENCFF726IBN 89 bp overlap
ChIP H1 ENCFF566JSR 192 bp overlap
ChIP H1 ENCFF770YBQ 181 bp overlap
ChIP H1 ENCFF833NJP 312 bp overlap
ChIP K562 ENCFF215CWW 304 bp overlap
ChIP MCF-7 ENCFF309IKZ 244 bp overlap
ChIP erythroblast ENCFF498VMR 330 bp overlap
ChIP spleen ENCFF044PYR 160 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 297 bp overlap
RBFOX2 2 datasets
ChIP K562 ENCFF196WTG 321 bp overlap
ChIP K562 ENCFF967GRF 325 bp overlap
RBM22 4 datasets
ChIP K-562 GSE120104.RBM22.K-562 61 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 60 bp overlap
ChIP K562 ENCFF420JDS 188 bp overlap
ChIP K562 ENCFF629OUL 231 bp overlap
SMAD3 1 dataset
ChIP breast-cancer_triple-negative GSE130364.SMAD3.breast-cancer_triple-negative 104 bp overlap
SMARCA4 4 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 111 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 170 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 61 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 311 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 330 bp overlap
SREBF1 2 datasets
ChIP MCF-7 ENCFF254QOR 304 bp overlap
ChIP TE-5 GSE143803.SREBF1.TE-5 295 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 187 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 70 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 73 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCFF866POT 61 bp overlap
XRN2 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.XRN2.DLD-1_NELFCD-AID 205 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.XRN2.DLD-1_NELFCD-AID_treated 80 bp overlap
ZBTB33 2 datasets
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 171 bp overlap
ChIP K562 ENCFF875HLX 262 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 141 bp overlap
ZNF354C 1 dataset
ChIP K562 ENCFF371JMA 210 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 330 bp overlap
ZNF687 2 datasets
ChIP MCF-7 ENCFF440BFX 330 bp overlap
ChIP MCF-7 ENCSR899BKM.ZNF687.MCF-7 228 bp overlap