chr5 : 129,099,217 129,099,470
253 bp 41 TFs 1 linked gene
This 253 bp open chromatin element is linked to ISOC1 and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ISOC1 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:129,094,217 – 129,104,470
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 67 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 144 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 178 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 253 bp overlap
BRD4 1 dataset
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 167 bp overlap
CEBPB 1 dataset
ChIP HeLa-S3 ENCFF722WEG 67 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 125 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 163 bp overlap
EBF1 7 datasets
ChIP ASC GSE54889.EBF1.ASC 198 bp overlap
ChIP GM12878 ENCFF167CZS 253 bp overlap
ChIP GM12878 ENCFF813OXE 197 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 225 bp overlap
ChIP LCL GSE75503.EBF1.LCL 237 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 253 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 209 bp overlap
EP300 2 datasets
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 167 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 180 bp overlap
ESR1 15 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 157 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 178 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 226 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.ESR1.MCF-7_ARID1A-KO 192 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 174 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 167 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 142 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 240 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 239 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 129 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 180 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 155 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 253 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 159 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 62 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 160 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 169 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 164 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 216 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 253 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 192 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 253 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 253 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 167 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 138 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 209 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 253 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 232 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 252 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 143 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.NR3C1.HeLa-B2_P65KD_TA_TNFA 88 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 209 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 253 bp overlap
PRDM6 4 datasets
ChIP HEK293 ENCFF283AJL 222 bp overlap
ChIP HEK293 ENCFF283AJL 101 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 253 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 139 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 253 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 253 bp overlap
RFX5 1 dataset
ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 151 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 192 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 239 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 253 bp overlap
STAT3 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 151 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 100 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 253 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 125 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 102 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 227 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 105 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 213 bp overlap